Leptothrix cholodnii: Lcho_2116
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Entry
Lcho_2116 CDS
T00681
Name
(GenBank) Carbamoyl-phosphate synthase L chain ATP-binding
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00280
Valine, leucine and isoleucine degradation
lch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Lcho_2116
Enzymes [BR:
lch01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Lcho_2116
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
HlyD_3
Biotin_lipoyl_2
ATP-grasp
Dala_Dala_lig_C
LAL_C2
NDUF_B12
GCV_H
DUF2118
ACCA_BT
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ACB34383
UniProt:
B1Y2P1
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All DBs
Position
complement(2312366..2314444)
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AA seq
692 aa
AA seq
DB search
MFKKILIANRGEIACRVATTARRLGVQTVAVYSDADARAQHVMTCDEAVHIGASAAKDSY
LQWQRILDAAKATGAQAVHPGYGFLSENEDFARACADAGLVFIGPPVAAIAAMGSKSAAK
SLMEQAGVPLVPGYHGDNNEPEFLLAQAERIGFPVLIKASAGGGGRGMRRVDRAEDFLAS
LASCQREASASFGNDHVLVERYVTRPRHIEIQVFGDTQGNCVYLFERDCSVQRRHQKVLE
EAPAPGMSAERRAEMGAAAVAAAKAVGYVGAGTVEFIAEPTDDGDLRFYFMEMNTRLQVE
HPVTEAITGFDLVEWQLRVASGEPLPAAQADLKIRGHAIEARICAENPDANFLPATGTLD
VLRWPAHVAFQRAGGPAPSRLKAGRAPSRGDSGTPEAGADIFVRVDAGVREGDAISPYYD
SMVAKLIVWGEDRAQALARLDAALRDTHIVGLNTNVAFLRRVVNSEAFASADLDTALIER
ERAVLFDQPGLLLAVAAAGVAAHALQSEAALETADPWSRRDGWRIHGGARRRFDLLVARE
HHVATLERLHDGALRLGVSGANCVFDARALGDGHHDITLDGERHRLSVYMQGERVTVFGA
DGLLELQEFDPIAHAGEAAVGGRLTAPMPGKVVALMAKAGDVVKQGQPLAVMEAMKMEHT
LAAPRDGVVAELLYAVGDQVGDGAELLRLAEQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaagatcctgatcgccaaccgcggcgaaatcgcctgccgcgtggccaccacc
gcgcgccgcctgggcgtgcagaccgtcgccgtctactccgatgccgacgcccgcgcgcag
catgtgatgacctgcgacgaggcggtgcacatcggcgcatccgcagcgaaagacagctac
ctgcaatggcagcgcatcctcgacgccgccaaggcgaccggtgcgcaggcggtgcacccg
ggctacggtttcctgagcgaaaacgaggacttcgcgcgcgcctgcgccgatgccggcctg
gtcttcatcggcccgccggtggcggcgatcgcggcgatgggcagcaagtccgccgccaag
tcgctgatggagcaggccggcgtgccgctggtgccgggttatcacggcgacaacaacgag
cccgagttcctactggcgcaagccgagcgcatcggctttccggtgctgatcaaggccagc
gcgggtggcggcgggcgtggcatgcggcgagtcgaccgggccgaggattttctggcctcg
ctggcctcgtgccagcgcgaggcgtcggccagcttcggcaacgatcacgtgctggtcgag
cgttacgtgacccggccgcgccacatcgagatccaggtcttcggcgacacccagggcaac
tgcgtctacctgttcgagcgggactgctcggtgcagcgccgccaccagaaggtgctcgaa
gaagcgcccgcgccgggcatgagcgcggagcgccgggccgagatgggcgcggcggcggtc
gcggcggccaaggcggtcggctacgtcggcgcgggcacggtcgagttcatcgccgaaccg
accgacgacggcgatctgcgcttctatttcatggagatgaacacgcggctgcaggtggag
cacccggtgaccgaggcgatcaccggcttcgacctggtcgagtggcaactgcgcgtggct
tcgggcgagccgctgccggccgcgcaggccgatctcaagatccgcggccacgcgatcgag
gcgcgcatctgcgccgagaaccccgacgccaacttcctgcccgccaccggcacgctcgac
gtgctgcgctggccggcgcacgtggcttttcagcgcgcaggcggcccggcgccgagccgc
ctcaaggcgggccgcgccccctcgaggggcgactccggtaccccggaggcgggggctgac
atctttgtgcgggttgacgccggcgtgcgcgagggtgacgcgatcagcccgtattacgac
tcgatggtcgccaagctgatcgtctggggcgaggaccgcgcccaggccctggcgcgactc
gatgcggcgctgcgcgacacccacatcgtcggcttgaacaccaacgtcgccttcctgcgc
cgggtggtcaacagcgaggcgtttgcgagcgccgacctcgacaccgcgctgatcgagcgc
gaacgcgccgtgctgttcgaccagcccggcctgctgctggcggtggccgcggccggcgtg
gccgcgcatgcgctgcagagcgaggcggcgctggagacggccgacccctggtcgcggcgc
gacggctggcgcatccacggcggggcgcggcggcgtttcgatctgctggtggcgcgcgaa
caccacgtcgccacgctcgaacggctgcacgacggcgcgctgcgcctgggcgtcagcggc
gcgaactgcgtgttcgatgcgcgagcgctcggcgacggccaccacgacatcacgctcgac
ggcgagcgccatcgcctgagcgtctacatgcagggcgagcgcgtcacggtgttcggcgcc
gacggcctgctggagctgcaggagttcgacccgatcgcccacgcgggtgaagccgcggtg
ggcggccgtctgaccgcgccgatgcccggcaaggtggtggcgctgatggccaaggcgggc
gacgtcgtcaagcagggccagccgctggcggtgatggaggcgatgaagatggagcacacg
ctggccgcgccgcgcgacggcgtcgtcgccgaactgctgtacgcggtgggcgatcaggtc
ggcgatggcgccgagctgctgcgcctggccgagcagtga
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