Leptothrix cholodnii: Lcho_2197
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Entry
Lcho_2197 CDS
T00681
Name
(GenBank) phage transcriptional regulator, AlpA
KO
K07733
prophage regulatory protein
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lch03000
]
Lcho_2197
Transcription factors [BR:
lch03000
]
Prokaryotic type
Other transcription factors
Others
Lcho_2197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_17
Phage_AlpA
Xre-like-HTH
AbiEi_4
HTH_22
Motif
Other DBs
NCBI-ProteinID:
ACB34463
UniProt:
B1Y3D5
LinkDB
All DBs
Position
complement(2396173..2396409)
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AA seq
78 aa
AA seq
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MQATAPSQTGKPKNPQPIEAAALPGALLTARTVSAVLGLSVATIYRLAAAGDLKPVRMGP
RCTRWRSGDVQAFMARQS
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaccgcacccagccagaccggcaagcccaagaacccccagcccatcgaagcc
gccgcactgcctggcgcactgctgacggcacgcaccgtctcggccgtgctcggcctgtcg
gtggcgacgatctaccgcctggccgcagccggcgacctcaagcccgtccgcatgggaccg
cgctgcacccgctggcgcagcggcgacgttcaggcgttcatggcccgccagtcgtaa
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