Leptothrix cholodnii: Lcho_2211
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Entry
Lcho_2211 CDS
T00681
Name
(GenBank) ABC transporter-related protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
lch
Leptothrix cholodnii
Pathway
lch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lcho_2211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_2211
Transporters [BR:
lch02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
Lcho_2211
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_33
AAA_22
RsgA_GTPase
SMC_N
AAA_30
AAA_29
AAA_16
MMR_HSR1
AAA_23
Septin
NACHT
TsaE
Dynamin_N
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ACB34477
UniProt:
B1Y3E9
LinkDB
All DBs
Position
complement(2411512..2413119)
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AA seq
535 aa
AA seq
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MRVDSSPAWLTLRGIHKRFGPTHALKGVDLDLVPGQVLAVIGENGAGKSTLVKTLTGVYQ
SDEGEIRIEGKPQRFLRAQDAQAAGIVAVHQETVMFEELSAAENIFIGRQPMRSVGPFKV
IDWARMNREAQAVLDQVGAGFASTTTVKNLSLAQRHLIEIARALSQKARVVILDEPTAAL
SQAEIRDFYGLVRGLKAQGVAVLFITHKFDEIFAVCDRYVVLRDGASVGEGAIADADEPM
LVKLMAGRAIEHIYPAITSQPGEVVLKVQGLSHPSEFADLSFELRRGEILGFYGLVGAGR
SEAMLALMGLNPAATGEVTVDGKRIEIRRPGDAIAAGMAYVPEERQRQGGILGFSVRHNI
SLAGLASGASALSRGPWLSPLREGALAAKMIERLRIKTASQDTPMSGLSGGNQQKVVIAK
WLGLNPRIVILDEPTKGIDVGAKQAVYHLIAEMVEQGLAVILVSSELPEVMHLAHRVIVM
RRGRMASEFAMGQADAETVVAAASGLELPPRSAVPAPLSAPDELRPITLNPELAA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagagttgattcatcccccgcctggctcacgctgcgcggcatccacaaacgcttcggt
ccgacccatgccctgaagggtgtggacctggacctggtgcccggccaggtgctggccgtg
atcggcgaaaacggcgccggcaagtcgaccttagtgaagacgctgaccggcgtctaccaa
tctgacgaaggcgagatccgcatcgaaggcaagccgcagcgcttcctgcgggcgcaggac
gcgcaggccgccggcatcgtggccgtgcaccaggaaacggtgatgttcgaggagctgagc
gccgccgagaacatcttcatcggtcgccagccgatgcgcagcgtcggcccgttcaaggtg
atcgactgggcgcgcatgaaccgcgaggcgcaggcggtgctcgatcaagtgggcgccggt
tttgcctcgaccacgacggtcaagaacctgagcctggcgcagcgccacctgatcgagatc
gcgcgggcgctgtcgcagaaggcccgcgtcgtgatcctcgacgagcccaccgcggccttg
tcgcaagccgagatccgtgatttctacgggctggtgcgcggcctcaaggcgcagggcgtg
gcggtgctcttcatcacccataagttcgacgagatctttgccgtctgcgaccgctacgtg
gtgttgcgcgacggcgcgtcggtgggcgagggcgcgatcgccgatgccgacgagccgatg
ctggtcaagctgatggccggccgggccatcgaacacatctatcccgccatcaccagccag
cccggcgaggtggtgctgaaggtgcagggcctgagccacccgagcgagttcgccgacctc
agcttcgagttgcggcgtggcgagatcctcggcttctacggcctggtgggcgccggccgc
agcgaggcgatgctcgcgttgatggggctcaacccggcagcgacgggtgaagtgacggtc
gacggcaagcgcatcgagatccgccgacccggtgacgcgatcgcagccggcatggcctat
gtgcccgaggagcgccagcgccagggcggcatcctcggcttctcggtgcggcacaacatc
agcctggcgggattggcgagcggagcctcggcgctgtcgcgtgggccgtggctgtcgccg
ctgcgcgagggcgcgctggccgcgaagatgatcgagcgcctgcgcatcaagaccgcgagc
caggacacgccgatgtcgggcctgtcgggcggcaaccagcagaaggtggtgatcgccaag
tggctgggcctgaacccgcgcatcgtcatcctcgacgagccgaccaagggcatcgacgtc
ggcgccaagcaggccgtctatcacctgatcgccgagatggtcgaacagggcctggcggtg
atcctggtgtcgtccgaactgcccgaggtgatgcacctggcgcaccgcgtgatcgtgatg
cgacgcggccgcatggccagcgagttcgcgatgggccaggccgatgcggaaaccgtggtg
gccgcggcatccggcctggaactgccaccccggtcggcggtgccggcacccctgagcgcg
cccgatgagctgcgacccatcaccctgaacccggagctggccgcatga
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