Leptothrix cholodnii: Lcho_2300
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Entry
Lcho_2300 CDS
T00681
Name
(GenBank) type I secretion system ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
lch
Leptothrix cholodnii
Pathway
lch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lcho_2300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_2300
02044 Secretion system [BR:
lch02044
]
Lcho_2300
Transporters [BR:
lch02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Lcho_2300
Secretion system [BR:
lch02044
]
Type I secretion system
Adhesin protein transporter
Lcho_2300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
HUTI_composite_bact
Peptidase_C39
AAA_22
AAA_29
DO-GTPase2
nSTAND3
MMR_HSR1
DLIC
cobW
TsaE
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
ACB34566
UniProt:
B1Y444
LinkDB
All DBs
Position
2495081..2497300
Genome browser
AA seq
739 aa
AA seq
DB search
MTAMLHATRTDSPAPASAVVTPLPTPAASPAPPVADSLRTCLLFLLEHHGRPLSAAALRA
MVARPDESWQIDDFVDAIESLGFATRTARADEPPEPAPNEPLLLIGVDGEANVLLGRRGN
DRIENWEVYLSATRKVVQLTRAELLARHGGQVVQVRPPQRVAGTDAGAPRGRHGHWFWGP
NLVARALYGRAIVASVVTSLFALASSIFTMIVYDRVIPNNAVETLWAMLFGVGIVFLSDF
AIRNVRGYFLDMAGGRADVEIADTVFDHVLDLDMRAQRGPTGSLASILKEYETIRDFATS
ATLTTLIDIPFALLFIVVLYWIGGPMAWVPVVAIPLMVLAGLLLQPNLKRQSQMSHDDSQ
TKQAVLVETLAGLETIKSLGAGAVMRRRWQDAVIHQARISMNARLLAQLAGNWANLVMMG
SQVAVVTVGVYLAADGQVGSGAIVAATILCGRAVQPLAQLSQLLIRLNQSMASYRSLARV
MAMPREHMPGQQTMAHDRLGGSIELREVSFRYPGNDTPVLDKVSLRIAAGERVAIIGRVG
SGKTTLIKMLLGLYRPDEGHLLVGGVDVRQIDTADLRRNVGSVLQDVWLMSGSVRDNIAL
GAERPSDDAVRHAAGLAGSHEFISQHPQGYQMRVGEGGMGLSGGQRQSIAMARALIGDAP
ILVLDEPTSAMDPAAERQLLDRLKTELQGRTVLLVTHKPSMLALVDKVIVLDGGRIVAAG
PRDQIMRMQSPAGTQKEAA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgacagccatgctgcacgccacccgcaccgactctcccgcgccggccagcgccgtcgtc
accccgctgccgacgcctgcggcctcgcccgcaccgccggtggccgacagcctgcggacc
tgcctgctgttcctgctcgagcaccacggccggccgctgtcggcggcggccttgcgcgcg
atggtggcgcgacccgacgagagctggcagatcgacgactttgtcgatgcgatcgagagc
ctcggcttcgcgacccgcaccgcccgtgccgatgagccacccgagccggcaccgaacgag
ccgctgctgctgatcggcgtcgacggcgaggccaacgtgctgctgggtcggcgcggcaac
gaccgcatcgagaactgggaggtctacctcagcgccacccgcaaggtggtgcagctcacc
cgcgccgagctgctggcccgccacggcggccaggtggtgcaggtgcgcccgccgcagcgg
gtcgccggcacagacgccggcgcgccgcgcgggcgccacggccactggttctggggcccg
aacctggtcgccagggcgctctacgggcgggccatcgtggcctcggtggtgaccagcctg
ttcgcgctggcgtcgtcgatcttcacgatgatcgtctacgaccgcgtgatccccaacaac
gccgtcgagacgctctgggcgatgctgttcggcgtcggcatcgtgttcctgtcggacttc
gcgatccgcaacgtgcgcggctatttcctcgacatggccggcgggcgcgccgacgtcgag
atcgccgacaccgtgttcgaccacgtgctcgacctcgacatgcgcgcccagcgcggcccc
accggcagcctggccagcatcctgaaagagtacgagaccatccgcgacttcgccacctcg
gccacgctgaccacgctgatcgacatcccgttcgccttgctgttcatcgtcgtgctgtac
tggatcggcggtccgatggcctgggtgccggtggtggcgatcccgctgatggtgctggcc
ggcctgctgctgcagcccaacctgaagcgccagtcgcagatgagccacgacgacagccag
accaagcaggcggtgctggtcgagaccctggccgggttggagaccatcaagtcgctcggt
gccggcgcggtgatgcgccggcgctggcaggacgccgtgatccaccaggcccgcatcagc
atgaatgcccgcctgctcgcgcagctggcgggcaactgggccaacctcgtgatgatgggc
tcgcaggtcgcggtggtgacggtgggcgtgtacctggcggccgacggccaggtcggctcg
ggcgcgatcgtggcggccaccatcctgtgcggccgggcggtgcagccgctggcgcagctg
tcgcagctgctgatccgtctcaaccagtcgatggccagctaccgctcgctggcgcgcgtg
atggcgatgccgcgcgagcacatgcccggccagcagacgatggcgcacgaccgcctgggc
ggctcgatcgagctgcgcgaggtcagcttcaggtaccccggcaacgacacgccggtgctc
gacaaggtctcgctgcgcatcgccgccggcgagcgggtggccatcatcgggcgggtcggc
tcgggcaagaccaccctcatcaagatgctgctcggcctgtaccggcccgacgaaggccac
ctgctggtgggcggcgtcgacgtgcgccagatcgacaccgccgacctgcgccgcaacgtc
ggctcggtgctgcaggacgtctggctgatgtcgggctcggtgcgcgacaacatcgccctc
ggcgccgagcgcccgagcgacgacgccgtgcgccacgccgccggcctggccggctcgcac
gagttcatctcgcagcacccgcagggctaccagatgcgggtcggcgaaggcggcatgggc
ctgtcgggcggccagcgccagtcgatcgcgatggcccgcgcgctgatcggcgacgcgccg
atcctggtgctcgacgagcccaccagcgcgatggacccggccgccgagcggcagctgctc
gaccgcctcaagaccgagctgcaaggccgcaccgtgctgctggtgacgcacaagccgtcg
atgctggcgctggtcgacaaggtgatcgtgctcgacggcggccggatcgtcgcggccggc
ccgcgcgaccagatcatgcgcatgcagtcgcccgcgggcacgcagaaggaggccgcgtga
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