Leptothrix cholodnii: Lcho_2407
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Entry
Lcho_2407 CDS
T00681
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lch03000
]
Lcho_2407
Transcription factors [BR:
lch03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Lcho_2407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
TetR_N
HTH_Tnp_ISL3
HTH_3
HTH_31
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ACB34672
UniProt:
B1Y4V9
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Position
complement(2613274..2614299)
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AA seq
341 aa
AA seq
DB search
MQPPSDPRIKKVTAKDVAERAGVSKWTVSRAFTDGGTVAPKVRERIRQIAAEMGYTPNLL
ARSLSTRSTRLIALVVDELGNFNQLRVLNEATRQMQARGYSTLLLNLSAEYGPAEAVNLA
DQFQVDGIVFLGTTLKRDLIELAQRIKHIPLVVILRNSGEADIRYVSTDGYVAGGEIADL
FLSEGYRRIGYMAGPMSERTELRRMEGFRDRLKEAGTPLSLVLEASHYRRSEGLQTLQRY
LEATPRGERIEALFCENDILAIGAMDALVATHSQRKIAIVGFDDIELGSSPSYELTTFRQ
PIEYLVSEALRRILDPDADSLGSLMAPGTLVMRQSHRRSAG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccctccgatccgcgcatcaagaaagtcacggccaaggacgtggcagagcga
gcgggggtttccaagtggaccgtgtcgcgcgccttcaccgatggcggcacggtcgcaccc
aaggtgcgtgagcgcattcgccagatcgccgccgagatgggctacacgcccaatctgctg
gcgcgcagcctgtccacgcgcagcacccggctgatcgcgctggtggtcgacgaactgggc
aacttcaaccagttgcgcgtgctcaacgaggccacccggcagatgcaggcgcgtggctac
agcaccctgctgctcaacctcagcgccgaatacggcccggccgaagcggtgaacctggcg
gaccagttccaggtcgacggcatcgtgtttctcggcaccacgctcaagcgtgacctgatc
gagctggcgcagcgcatcaagcacatcccgctggtcgtgatcctgcgcaacagcggcgag
gccgacatccgctacgtcagcaccgacggctacgtggcgggcggcgagatcgccgacctg
ttcctgagcgagggctaccgccggatcggctacatggccggcccgatgtccgagcgcacc
gagctgcggcgcatggagggctttcgcgaccgcttgaaagaggccggcacgccgctgtct
ctggtgctcgaagccagccactatcgccgcagcgaaggcctgcagacgctgcagcgctat
ctcgaggcgacgcctcgcggcgagcgcatcgaggcgctgttctgcgaaaacgacatcctg
gccatcggcgcgatggatgcgctggtggcgacccactcgcagcgcaagatcgccatcgtc
ggcttcgacgacatcgagctcggcagctcgcccagctacgagctcaccaccttccgccag
ccgatcgaatacctcgtcagcgaggcgctgcgccgcatcctcgacccggatgcggactcg
ctgggttctctgatggcgcccggcacgctggtgatgcgccaatcgcatcgccgcagcgcg
ggctga
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