KEGG   Leptothrix cholodnii: Lcho_2499
Entry
Lcho_2499         CDS       T00681                                 
Name
(GenBank) Peptidoglycan-binding domain 1 protein
  KO
K02450  general secretion pathway protein A
Organism
lch  Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:lch00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lch02044]
    Lcho_2499
Secretion system [BR:lch02044]
 Type II secretion system
  General secretion pathway protein
   Lcho_2499
SSDB
Motif
Pfam: AAA_22 AAA_16 GspA_C39-like AAA_19 AAA_30 Sigma54_activ_2 TsaE AAA AAA_5 AAA_14 AAA_25 nSTAND3 TniB ABC_tran T2SSE PG_binding_1 ATPase_2 CoaE NTPase_1 cobW TrwB_AAD_bind AAA_7 SLFN-g3_helicase Ribosomal_L12_N
Other DBs
NCBI-ProteinID: ACB34764
UniProt: B1Y6C8
LinkDB
Position
complement(2720725..2722413)
AA seq 562 aa
MLKAMYASFFGLQQEPFSIAPDPRYLYMSEHHREALAHLLYGIRGGGGFVLLTGEIGAGK
TTVCRCFLEQIPEQCNFAYIFNPKLTVHELLKAVCEEFGVDAPSAGTPGVTVQDYVAPLN
RFLLDAHAGGRNSVLVIDEAQNLSVDLLEQLRLLTNLETAERKLLQIVLIGQPELRDMLA
RPELEQLAQRVIARFHLQPLSESETAQYVLHRLRVAGLGSASPFDRKELQRIHRLSRGVP
RRINLLCDRALLGAYAHGQSRVGREVVKKAAREVFDDAAQRAARRAADRGNQFRMLAWGT
GMVVLAVAVGLAASAWQSGLLRRVAGAAAPAGASSANGQGAAALAAGAAAAVPEAAGFGA
PTLDRLDVAYGWRTEQQALRVLSRGWGELLGGGDVCDEARRKQLICYRSTVSLALVQQLD
RPGTLTLVNANNQRGHVLLLGVNDQLALLQTADGRIKVPLLSLAQVWRGEFTTFWRAPPG
YLEQSPGSQSTAVAQMLSQQLPVPSGPDGGAASASAEASLRARIHAFQVTQALQPDGLIG
PVTMMKLNRALGVDEPRLEVLR
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgctcaaggccatgtacgcgtcatttttcggtctgcagcaggagccgttttcgatcgcc
cccgatccgcgctacctgtacatgagcgagcaccaccgtgaggccctggctcacctgctc
tacggcatccgcggcggcggcggtttcgtgctgctgaccggcgagatcggtgcgggcaag
accacggtgtgccgctgtttcctggagcagatcccggagcagtgcaacttcgcctacatc
ttcaaccccaagctcaccgtgcacgagctgctcaaggccgtgtgcgaggagttcggcgtc
gacgcgccctcggccggcacgccgggcgtgacggtgcaggactacgtggcgccgctcaac
cgcttcctgctcgatgcccatgccggcgggcgcaacagcgtgctggtgatcgacgaggcg
cagaacctgtcggtcgatctgctcgagcagctgcgcctgctgaccaacctcgagaccgcc
gagcgcaagctgctgcagatcgtgctgatcggccagcccgagctgcgcgacatgctggcg
cgtcccgagctggagcagctggcgcagcgggtgatcgcgcgtttccacctccagccgctg
tcggagtccgagaccgcgcagtacgtgctgcaccggctgcgcgtggcgggcctgggttcg
gcctcgccgttcgaccgcaaggagctgcagcgcatccaccggctctcgcgtggcgtgccg
cggcgcatcaacctgctgtgcgaccgcgccttgctgggcgcctatgcgcacggccagtcg
cgggtcggccgcgaggtggtgaagaaggcggcgcgtgaggtcttcgacgacgccgcccag
cgcgccgcccgccgtgccgccgatcgcggcaaccagttccgcatgctcgcctggggcacc
ggcatggtggtgctggcggtggcggtggggctggccgcgagcgcctggcagagcggcctg
ctgcgccgggtggccggcgcggctgcgccggcaggcgccagctcggcgaacggccagggc
gctgcggcgcttgcggccggcgcggcggcggcggtgcccgaagccgccggcttcggcgcg
cccaccctcgaccggctcgacgtcgcctacggctggcgcaccgagcagcaggccttgcgc
gtgctgtcgcgcggctggggcgagctgctcggcggcggcgacgtctgcgacgaggcccgg
cgcaagcagctgatctgctatcggtccaccgtcagcctggcgctggtgcagcagctcgac
cggcccggcacgctgacgctggtcaacgccaacaaccagcgtggccacgtgctgctgctg
ggcgtgaacgaccagctggcgctgctgcagaccgccgacggccgcatcaaggtgccgctg
ctgagcctggcgcaggtctggcgcggcgagttcacgaccttctggcgcgcgccacccggc
tacctcgagcagagcccgggctcgcaatcgaccgcggtggctcagatgctgagccagcag
ctgccggtgccgtcgggcccggacggcggcgccgcatcggcgtcggccgaggccagcctg
cgggcgcgcatccacgccttccaggtgacccaggcgctgcagcccgacggcctgatcggg
ccggtcacgatgatgaaactcaaccgcgcgctcggggtcgacgagccgcgcctcgaagtc
ctgaggtag

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