Leptothrix cholodnii: Lcho_2507
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Entry
Lcho_2507 CDS
T00681
Name
(GenBank) Radical SAM domain protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lch03009
]
Lcho_2507
Enzymes [BR:
lch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Lcho_2507
Ribosome biogenesis [BR:
lch03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Lcho_2507
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
ACB34772
UniProt:
B1Y6D6
LinkDB
All DBs
Position
complement(2733490..2734533)
Genome browser
AA seq
347 aa
AA seq
DB search
MRIDFIRQRLRAQGAKPCHEQRILRIWAQVLPTEGGRSRPDDFLPQAVRDAMPALLADLD
GLARLRSQHPGEDGSARLLVELADGQTVESVLLPRDGLCVSTQVGCAVGCVFCMTGREGL
LRQVGSAEIVAQVVLARRQRLVKKVVFMGMGEPAHNLDNVMEAIDFLGTTGAIGHKNLVF
STVGDPRVFERLPLGPVKPALALSLHTTRADLRAQLLPRAPRMDPADLVERAEAYARATS
YPIQYQWTLLEGINDGPDEVEGIVRLLHGKYAVLNMIPYNTVPDLPYTRPSWEAAAALAR
TLHRRGILTKLRQSAGQDVEGGCGQLRARELAPSARRIEIRPVASLP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgatttcatacgccaacgcctgcgtgcccaaggtgcgaaaccctgtcacgaa
cagcggattttgcggatttgggcgcaggtgctgccgaccgaaggtggccgcagtcgcccc
gacgatttcctcccgcaggccgtgcgcgacgccatgccggcgctgctggccgatctggac
ggcctggcccgcctgcgctcgcagcaccccggcgaggacggttcggcgcgcctgctggtc
gaactggccgatggtcagacggtcgagagcgtgttgctgccgcgcgacggtctgtgcgtg
tcgacccaggtcggctgcgcggtcggctgcgtgttctgcatgaccgggcgcgagggcctg
ctgcgccaggtcggcagcgccgagatcgtggcgcaggtggtgctggcgcggcgccagcgg
ctggtcaagaaggtggtgttcatgggcatgggcgagcccgcgcacaacctcgacaacgtg
atggaggcgatcgacttcctcggcacgaccggcgccatcggccacaagaacctggtgttc
tcgaccgtgggcgacccgcgcgtgttcgagcgcctgccgctcgggccggtcaagccggcg
ctggcgctgtcgctgcacaccacgcgggccgatctgcgcgcgcaactgctgccacgcgcg
ccgcgcatggacccggccgatctggtcgagcgcgccgaagcctatgcacgcgccaccagc
tacccgatccagtaccagtggacgctgctcgaaggcatcaacgacgggcccgacgaggtc
gagggcatcgtgcggctgctgcacggcaagtacgcggtgctgaacatgattccgtacaac
acggtgcccgatctgccgtacacgcggccgtcgtgggaggccgccgccgcgctggcgcgc
acgctgcaccggcgcggcatcctgaccaagctgcggcaatcggccgggcaggacgtggag
ggtggctgcggccagctgcgcgcgcgtgagctggcgccgtcggcgcggcgcatcgagatc
cggccggtcgcctcgctgccctga
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