Leptothrix cholodnii: Lcho_2624
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Entry
Lcho_2624 CDS
T00681
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
lch
Leptothrix cholodnii
Pathway
lch02020
Two-component system
lch02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lcho_2624
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lcho_2624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lch02022
]
Lcho_2624
Two-component system [BR:
lch02022
]
OmpR family
QseC-QseB (quorum sensing)
Lcho_2624
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Ortholog
Paralog
GFIT
Motif
Pfam:
Trans_reg_C
Response_reg
DUF1598
OKR_DC_1_N
GerE
Motif
Other DBs
NCBI-ProteinID:
ACB34889
UniProt:
B1Y7D4
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All DBs
Position
complement(2874913..2875632)
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AA seq
239 aa
AA seq
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MRLLLAEDDALLGDGLRAGLRALGFQVDWVRDGVAAERELSNQSYTAAVLDLGLPRIDGL
DVLQAVRRRGVKTPVLVLTARDAVPQRIETLDAGADDYVVKPIDLHELAARLRALVRRSH
GQVQDLISVNGVDLDPGAREVRLDGDPIKLSTREFDLLHALMLRPGRVLTREQLENHLYG
WGEEVGSNTVEVHVHHLRRKLGNQRIRTVRGVGYAFAPPPSSEAPLDAAQAGPLAQPMD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttttgcttgctgaagacgatgccctgctgggcgatggattgcgcgctggcctg
cgtgccctgggcttccaggtcgactgggtgcgcgacggggtggcggccgagcgcgaactc
tccaaccagagctataccgccgccgtgctggatctcggcctgccgcgcatcgatggtctc
gacgtgctgcaggcggtgcgtcggcgtggcgtcaagacaccggtgctggtgctgaccgcc
cgtgatgccgtgccccagcgcatcgagaccctcgatgccggtgccgacgactatgtcgtc
aagccgatcgacctgcacgaactggccgcacggctgcgtgccctggtgcgccgctcgcac
ggtcaggtgcaggacctgatcagcgtcaacggcgtcgatctcgatcccggtgcccgcgag
gtcaggctcgacggcgatccgatcaagctgtcgacccgcgagttcgacctgctgcacgcg
ctgatgcttcggccgggccgggtcctgacccgcgaacagctcgagaaccacctctacggc
tggggcgaggaggtcggcagcaacacggtcgaggtgcacgtccaccacctgcggcgcaag
ctcggcaaccagcgcatccgcaccgtgcgcggcgtcggttacgcatttgcgccgccgccg
tcgagcgaggcgccgctcgatgccgcacaggccggccctctggcccagccgatggactga
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