Leptothrix cholodnii: Lcho_2646
Help
Entry
Lcho_2646 CDS
T00681
Name
(GenBank) TonB-dependent receptor plug
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_2646
Transporters [BR:
lch02000
]
Other transporters
Pores ion channels [TC:
1
]
Lcho_2646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ACB34911
UniProt:
B1Y841
LinkDB
All DBs
Position
2906719..2909091
Genome browser
AA seq
790 aa
AA seq
DB search
MRPIVRPSQDPTASLVPRRNAGPISHAVAMLLLGLTSLSAHSQTGSSPGTPTDGSVETRE
VKPPAEPTARPPATAPALERVEIIGTASDTDVRRESSAAKIVIGREELDRMGDSSVSEVL
KRLPGVTLGGRPGRGGAVRMRGLGSGYTQILINGERMSAGLSLDDLTPEQLERIEVLRAP
TAETGAQAIAGTINIVLREEVRKRLNNVHLILTHDDRHWQPSATLNRANQDGAFSYNLNG
QISHGDRESESLRRTLETSTPDAGGAETTTLDQTDTSFSRDRRNSVHLGGRLQWRLSPTD
TLALTPFAIVSNNQGHASSLRTQAVPGSAPDFDRSSGASTSQYRLARLNGQWQGRFEGGA
RLELRAGSSAWMFDSDSERREFSAGSQNRLQQDRSEIREQWWSTGGKYTRNLAGEHQLAT
GWEADWGRRDDTRVSLQTLPGTATTSLLADFGDNLRAHTVRTAVWAQDEWDLSGQWALHG
GLRWEGIGTRSDAPDAPVRNHSQVLSPLLHAIYRIEEGGRDQIRASLTRSYRAPTLQNLA
ARPSINSTFPATGANQPTSPDRAGNPDLKPELATGLDVAYEHYLGGGGVLSAGVFHRRIN
QLIRNQTALETVSWSSVPRHVSRPQNIGRASTSGIELEAKLRLDEWRDGAAPVDLRGNLA
LFQSRVDGIVGPDNRLDQQPGWTANLGADYRLRSWPLTLGGNLALTPGYAVQQSNAQRFE
QDAKRVLDAYLLWRMSPATQLRFTASNLVARDFHNISTVVGSDGSNTLRQTALSTDPSLT
VWGLRLEMKL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccatcgttcgtccgtcccaggatccgaccgccagcctcgttccccgccgcaac
gccggcccgatcagccacgccgtggcgatgctgctgctcggcctgaccagcttgagcgcg
cacagccagaccggcagcagccccgggacaccgacggatggctcggtcgagacccgcgag
gtcaagccgcccgccgagcccactgctcgcccgcccgccaccgccccggcgctcgaacgc
gtcgagatcatcggcaccgccagcgacaccgacgtgcggcgtgaatctagcgccgccaag
atcgtgatcggccgcgaggaactcgaccgcatgggcgacagcagcgtcagcgaggtgctc
aagcgcctgcccggcgtgacgctgggcgggcgacccggtcgcggcggcgccgtgcgcatg
cgcgggctgggcagcggctacacgcagatcctgatcaacggcgagcgcatgagcgccggc
ctgtcgctcgatgacctgacacccgaacagctcgaacgcatcgaggtgctgcgcgcaccc
accgccgaaaccggcgcgcaggcgatcgccggcacgatcaacatcgtgctgcgcgaagag
gtgcgcaagcggctcaacaacgtccacctgatcctcacgcacgacgaccggcactggcag
ccctcggcgacgctgaaccgcgccaatcaggacggcgccttcagctacaacctcaacggc
cagatctcgcacggcgaccgcgaaagcgaatcgctgcggcgcacgctcgaaaccagcacg
cccgacgccggcggcgccgaaaccaccacgctcgaccagaccgacaccagcttcagccgc
gaccgccgcaacagcgtgcacctgggcgggcggctgcaatggcggttgagcccgaccgac
acgctggcgctgacgccgttcgcgatcgtctccaacaaccagggccacgccagcagcctg
cgcacgcaggcggtgccgggcagcgcgcccgacttcgatcgcagcagcggcgcatccacc
agccagtaccggctggcgcgcctgaacggccagtggcagggccgcttcgagggcggcgcc
cggctggagctgcgcgccggcagcagcgcgtggatgttcgacagcgacagcgagcggcgc
gagttcagcgccggcagccagaaccgccttcagcaggatcgctccgagatccgcgaacag
tggtggagcaccggcggcaagtacacccgcaacctggccggcgagcaccagctcgccacc
ggctgggaggccgattggggccgccgagacgacacccgcgtcagcctgcagacgctgccc
ggcacggccaccacctcgctgctggccgacttcggcgacaacctgcgggcccacacagtg
cgcaccgccgtctgggcgcaggacgagtgggatctgagcggccagtgggcgctgcacggc
ggcctgcgctgggaaggcatcggcacccgcagcgacgcgccggacgcgccggtgcgcaac
cacagccaggtgctgagcccgctgctgcacgcgatctaccgcatcgaagagggcgggcgc
gaccagatccgcgccagcctgacacgcagctaccgcgcgccgacgctgcagaacctggcc
gcgcggccgtcgatcaacagcaccttcccggccaccggcgccaatcagccgaccagcccc
gaccgcgccggcaacccggatctcaagcccgaactggccaccggcctggacgtggcgtac
gagcattacctgggcggcggcggcgtgctgagcgcgggcgtcttccaccgccgcatcaac
cagctgatccgcaaccagaccgcgctcgagacggtcagctggtcgagcgtgccgcgccac
gtgtcgcggccgcagaacatcggccgcgccagcaccagcggcatcgagctcgaagccaag
ctgcgcctcgacgagtggcgcgacggcgccgcgccggtcgacctgcgcggcaacctggcg
ctgttccagtcacgggtcgacggcatcgtcggccccgacaaccggctcgaccagcagccc
ggctggaccgccaacctcggcgccgactaccgcctgcgcagctggccgctgacgctgggc
ggcaacctggcgctgacacccggctatgcggtgcagcagagcaacgcccagcgcttcgaa
caggacgccaaacgggtgctcgacgcttacctgctgtggcgcatgagcccggcgacgcag
ctgcgcttcacggccagcaacctcgtggcgcgcgacttccacaacatcagcaccgtcgtc
ggcagcgacggcagcaacaccctgcggcagaccgcgctgagcaccgatccgagcctgacg
gtgtggggcctgcggctcgagatgaagctttga
DBGET
integrated database retrieval system
