Leptothrix cholodnii: Lcho_2707
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Entry
Lcho_2707 CDS
T00681
Name
(GenBank) transcriptional regulator, GntR family
KO
K03710
GntR family transcriptional regulator
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lch03000
]
Lcho_2707
Transcription factors [BR:
lch03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Lcho_2707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_41
MarR_2
MarR
HTH_11
HTH_Tnp_4
HTH_24
KNOX1
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ACB34972
UniProt:
B1Y8A2
LinkDB
All DBs
Position
complement(2977429..2978208)
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AA seq
259 aa
AA seq
DB search
MSHIASNTPPNPAADAAGESTPAFSPLYQQIKALIMRGLQGGEWKPGEAIPSELDLAARF
KVSQGTVRKAIDELAAENLLVRRQGKGTFVATHNEEKIQYRFLRLQPEDGGPPLPMQREF
LDCRRLRAPVDVVRSLDLRSGDMVVQIRRTLSQAGRPIVLDDIWLPGNLFKGLTAERLSE
YRGPLYSLFESEFGVRMIRAEEKIRAIGADRSVATLLCVSEGTPLLSVERLSLTYGDKPV
ELRRGLYNTTHHHYRNELS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatattgcgtccaatacgccgcccaatcctgccgccgatgcggccggcgagtcg
acgcctgcgttcagcccgctctatcagcagatcaaggcgctgatcatgcgtggcctgcag
ggcggcgaatggaagcccggcgaggcgattccgagcgagctcgacctggccgcgcgtttc
aaggtcagccagggcaccgtgcgcaaggccatcgacgaactggcggccgagaacctgctg
gtgcgccggcagggcaagggcacgttcgtcgcgacccacaacgaagagaagatccagtac
cggttcctgcggctgcaacccgaagacggcggcccgccgctgccgatgcagcgcgagttt
ctcgattgccgacgcctgcgtgcgccggtcgacgtggttcgctcgctcgatctgcgctcg
ggcgacatggtggtgcagatccgccgcacgctctcgcaggccggcaggccgatcgtgctc
gacgatatctggctgcccggcaatctgttcaagggcctgactgccgagcgcctgagcgag
tatcgcgggccgctctacagcctgttcgaatccgaattcggcgtgcgcatgattcgcgcc
gaagagaagatccgtgccatcggtgccgatcgttccgtcgcaaccttgttgtgcgtgagt
gaaggcactccgttgctgagcgtcgaacgcctgtcgctgacctatggcgacaagccggtc
gagctgcggcgcggcctctacaacaccacgcatcatcattaccgcaacgagttgagctga
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