Leptothrix cholodnii: Lcho_2767
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Entry
Lcho_2767 CDS
T00681
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lch
Leptothrix cholodnii
Pathway
lch03420
Nucleotide excision repair
lch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Lcho_2767
03430 Mismatch repair
Lcho_2767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_2767
Enzymes [BR:
lch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lcho_2767
DNA repair and recombination proteins [BR:
lch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lcho_2767
MMR (mismatch excision repair)
Other MMR factors
Lcho_2767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACB35032
UniProt:
B1XWN1
LinkDB
All DBs
Position
3049400..3051946
Genome browser
AA seq
848 aa
AA seq
DB search
MSALPPSPPLPDSGHPAFADIGFDEPDRRDETHDPHEPPARPALPAGLLANLNPEQYAAV
TLAAEPALILAGAGSGKTRVLTTRIAWLLQTGQIGPGGLMAVTFTNKAAKEMVHRLSTML
PYNVRGMWIGTFHGLCNRFLRAHWKMAGLPQSFQILDSGDTLSAVKRVIKAMKLDEERFV
PKQVSWFIASSKDDGKRPKDLPTDDGQARTMVEIYQAYEDQCQREGVVDFAELMLRSYEL
MRDHPEIREHYQRRFRHILVDEFQDTNRLQYLWLKMFAGTPGALAGREPAAVFAVGDDDQ
SIYAFRGAQVGNMSDFEREYRVRQVIKLERNYRSFGNILDSANALIAHNSRRLGKNLRTE
AGPGEPVRIFESTSDFAEAQWLLEELQQLHRGGMARSETAILYRSNAQSRVIESALFNAG
MPYRVYGGLRFFERAEIKHALAYLRLTENPNDDTSFLRVVNFPARGIGARSVELLQDAAR
ASGRSLYQSVGALGGAAGTKLAGFTALVDRLRDATRGLTLREIIERMLDASGLINFYRTE
KEGQDRIENLEELVNAAEAFVTIEGFGKDAVALPVDETAPGTIAAPLPGEPEAVAAVDLL
PDAETGEILSPLAAFLTHAALEAGDNQAQAGQDAVQLMTVHSAKGLEFDAVFITGLEEGL
FPHENSLNSISAGGNEGLEEERRLMYVAITRARQRLYISFSQTRMLHGQTRYNVKSRFFD
ELPEAALKWITPKQQGFGSGYAQQYQQAWQRGSGPGGMVGAGRNSGWQPAPAAPPSWAAP
VPAAMRQSAAKDNGHGLRQGQGVFHTKFGEGVVLTLEGVGADARAQVNFGRHGTKWLALA
IAKLTPIE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccctgcctccctcgccccccctgcccgattccggccatcccgcctttgccgac
atcggcttcgacgagcccgaccggcgggatgaaacacacgacccgcacgagccgccggcg
cggcctgcgctgcccgcgggcctgctcgccaacctcaacccggagcagtacgccgccgtc
acgctggcggccgagccggcgctgatcctggccggcgccggctcgggcaagacccgcgtg
ctgaccacccgcatcgcctggctgctgcagaccggccagatcggccccggcggcctgatg
gcggtcaccttcaccaacaaggccgccaaggagatggtgcaccgcctctcgacgatgctg
ccttacaacgtgcgcggcatgtggatcggcaccttccacggcctgtgcaaccgcttcctg
cgcgcgcactggaaaatggccggcctgccgcagagcttccagatcctcgactcgggcgac
acgctgagcgcggtcaagcgcgtcatcaaggccatgaagctcgacgaggaacgcttcgtg
cccaagcaggtgagctggttcatcgcgtccagcaaggacgacggcaagcgcccgaaagac
ctgcccaccgacgacggccaggcgcgcacgatggtcgagatctaccaggcctacgaggac
cagtgccagcgcgagggcgtggtcgatttcgccgagctgatgctgcgcagctacgagctg
atgcgcgaccacccggagatccgcgagcactaccagcggcgcttccgccacatcctggtc
gacgaatttcaagacaccaaccggctgcagtacctgtggctgaagatgttcgccggcacg
cccggcgcgctcgccgggcgcgagccggcggcggtgttcgcggtcggtgacgacgaccag
agcatctacgccttccgtggcgcgcaggtcggcaacatgagcgacttcgagcgcgagtac
cgcgtcaggcaggtcatcaagctggagcgcaactaccgctcgttcggcaacatcctcgac
tcggccaacgcgctgatcgcccacaacagccgccgcctgggcaagaacctgcgcaccgag
gccgggcccggcgagccggtgcggatcttcgagtcgaccagcgatttcgccgaggcacag
tggctgctcgaagaactgcagcaactgcaccgcggcggcatggcgcgcagcgaaaccgcg
atcctctaccgcagcaacgcgcagtcgcgcgtgatcgagtcggcgctgttcaacgccggc
atgccctaccgcgtctacggcggcctgcgcttcttcgagcgcgcggagatcaagcacgcg
ctggcctacctgcgcctgaccgagaacccgaacgacgacaccagcttcctgcgtgtcgtc
aacttcccggcccgcggcatcggcgcacgcagcgtcgagctgctgcaggacgcggcccgc
gccagcggccgcagcctctatcaaagcgtgggcgcactcggcggcgcggccggcaccaag
ctggcgggcttcaccgcgctggtcgaccggctgcgtgacgccacccgcggcctgacgctg
cgcgagatcatcgaacgcatgctcgacgccagcggcctgatcaacttctaccgcaccgag
aaggaaggccaggaccgcatcgagaacctggaggaactcgtcaacgcggccgaggccttc
gtgacgatcgagggtttcggcaaggacgcggtggcgctgccggtcgacgagaccgcgccc
ggcaccatcgccgcgcccctgcccggcgagcccgaggcggtggccgcggtcgacctgctg
cccgacgccgaaaccggcgagatcctgtcgccgctggcggcctttttgacccacgccgcg
ctcgaagcaggcgacaaccaggcccaggccggccaggacgccgtgcagctgatgacggtg
cactcggccaagggcctggagttcgacgcggtcttcatcaccgggctcgaagaaggcctg
ttcccgcacgagaactcgctcaacagcatcagcgccggcggcaacgaaggcctcgaagaa
gagcgccggctgatgtacgtggcgatcacgcgggcgcggcagcggctgtacatcagcttc
agccagacccgcatgctgcacggccagacgcgctacaacgtcaagagccgcttcttcgac
gagctgcccgaggcggcgctgaagtggatcacgcccaagcagcagggtttcggctcgggt
tacgcgcagcaataccagcaggcctggcagcgcggctcgggccccggcggcatggtcggc
gccgggcgcaacagcggctggcaaccggccccggcggcgccgccgtcatgggccgcgccg
gtgcccgcggcgatgcgccagagcgcggccaaggacaacggccacggcctgcgccagggc
cagggcgtgttccacaccaagttcggcgagggcgtggtgctgacgctcgaaggtgtcggc
gcggacgcccgcgcccaggtcaacttcggccgccacggcaccaagtggctggcactcgcg
atcgccaagctgacgccgatcgagtga
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