Leptothrix cholodnii: Lcho_2876
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Entry
Lcho_2876 CDS
T00681
Name
(GenBank) putative transmembrane protein
KO
K05807
outer membrane protein assembly factor BamD
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_2876
Transporters [BR:
lch02000
]
Other transporters
Pores ion channels [TC:
1
]
Lcho_2876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfiO
TPR_18
TPR_6
TPR_21
SRP_TPR_like
TPR_9
TPR_14
TPR_16
Motif
Other DBs
NCBI-ProteinID:
ACB35141
UniProt:
B1XY96
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All DBs
Position
3166400..3167254
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AA seq
284 aa
AA seq
DB search
MHQPAPAPINRQTQIMFKFVQPQGLRVLTATAVVAVLLAGSLGGCAADPKALPEHQNVGK
LYEEAREEAAAGASDRAIKLYERLEGLAAGTLLAQQAQLERAFLHYKMQEKAQSLAIIER
FLKLHPTSPAADYAYYLQGLINFNDDLGLFGSIVKTDLAERDQQASRDAYQSFKQLVDRY
PDSRYAPDARLRINYIINALAAHEVHVARYYYQRGAYVASANRAQQAVQDFRGVPAAEEA
LYLMAASYHQLGMAPLRDDAWRVLQNNYPKSRWLSQRLGSSALR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagcccgcgccggcgccgatcaaccggcaaacccagatcatgttcaagttcgtt
caaccccaaggtttgcgtgtgctgaccgcgactgccgtcgtggccgtgctgctggcgggc
tcgctcggcggctgcgcggccgatccgaaggcgctgcccgagcaccagaatgtcggcaaa
ttgtacgaagaggcccgcgaggaagccgccgccggtgcgagcgaccgcgccatcaagctc
tacgagcgcctcgaaggcctggccgccggcacgctgttggcccagcaggcgcagctcgaa
cgcgccttcctgcactacaagatgcaggagaaggcgcagtcgctggcgatcatcgagcgc
tttctcaagctgcacccgaccagcccggcggccgactacgcctattacctgcaggggctg
atcaacttcaacgacgacctgggcctgttcggcagcatcgtcaagaccgatctggccgag
cgcgatcagcaggcctcgcgcgacgcctaccagagcttcaagcagctggtcgatcgctac
cccgactcgcgttatgcgccggatgcgcggctgcgcatcaactacatcatcaacgcgctg
gcggcgcatgaagtgcacgtggcgcgctactactaccagcgtggcgcctatgtggcgtcg
gccaaccgggcccagcaggcggtgcaggatttccgcggcgtgcccgcggccgaggaggcg
ctctacctgatggcggccagctaccaccagctcggcatggcgccgctgcgtgacgacgcc
tggcgggtgctgcagaacaactatccgaagagccgctggctgagtcagcgcctgggcagc
agcgcgctgcgctga
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