Leptothrix cholodnii: Lcho_2909
Help
Entry
Lcho_2909 CDS
T00681
Name
(GenBank) type IV fimbrial biogenesis protein PilY1
KO
K02674
type IV pilus assembly protein PilY1
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lch02044
]
Lcho_2909
02035 Bacterial motility proteins [BR:
lch02035
]
Lcho_2909
Secretion system [BR:
lch02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Lcho_2909
Bacterial motility proteins [BR:
lch02035
]
Pilus system
Pilus assembly proteins
Lcho_2909
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
ACB35174
UniProt:
B1XYC9
LinkDB
All DBs
Position
3204161..3208090
Genome browser
AA seq
1309 aa
AA seq
DB search
MSIRPTSPAARGARLTSKAGPRALRSPILSAVLLVLLGSTWAATPDISNVPLSSTSTTTA
KPNIMFILDDSGSMAWDFMPDELDDNNDQVGDNVYGFRSAQCNGVAYNPDITYTPPVRID
PTTGAVSNYADASFTAARSDGFSTSSGVTDLTGRVYYHYLGSEPALSWRYGSNGTVDRTT
TFFTECMTAIPADGAGNARFEQRTMSNASTDAQNYANWYSYYRKRQLTMRSAAGRAFADL
SNAYRVGFTRISQTGVTGTSFLNVGDFDTAQKTSFFNLLYTSGISGSTPLRGALSKVGRY
YGNVIAGQTDPVQYSCQRNYAVLSTDGYWNTGNESTTYRALALDGTTLVGQQDGTEVRPM
KDGSTVTVTRVTISGSVDRTQTILDRRTDITLRRTANTITNNSCNSGNGRRVSQQGQRRI
DTASFQRTLVQDVTNRTTVTQVTTNGIPANPTSTTTANAAQVSATDGSVTATTTGTWNNN
GGSNTNCIARSSLPTGWSTGTVYYTPGVDGTELSRNTVTLATGTPTVLSTGPLADAGTTE
TTATTAGDSNSLADIAQYYWKTDLRPDMVDNVPTSGDDSAAHQHMTTFTIGLGLKGTLSY
DRNYLTQTTGDFADLRSGAKNWPVPRGTTGGSENATHIDDLWHAGVNGRGQYFSAADPNQ
LDDAISTTLSAIRRVTESGAAAAASTLTPVTGDDWVFLPSFTTIDWTGDLRAFKFTFNSA
NELVAPNTAAGNEIWSAGNQLRARTSSRRILFNNAGTLGDFTYDNLTAAGQGALFDNRCG
SALSSPATNLSQCATLTPAALAKVTGANLVNFLAGDATLYQSAADVDNQVFRTRNGLLGD
FVNASPVYVGKPPFRYADADYASFVSAQANRTKVVYAAANDGMLHAFKVGTGAGDGTGGA
ELWAFVPSAVMPEMWRLASESYDTDHRFFVDATPNVSDIYDSAAGRWRTILVGGLGAGGR
SYYALDVTTPESPVLLWEFSDANLGLTYGNPVVTKDATGTWVVVFTSGLNNNAGSGDGVG
RLYVVNAVTGALVRTVATSAGDVGTPSNLGRLNAWINADSDNTALRFYAGDMLGNVWRFD
HDDRLAPAGREAVLLGKAQSADGTAQPITGKLVLTEASINGLQTPVVSFGTGRLLNLDDL
TNTTLQSIYSIKDTLGETGVGVLRDTGAALVQQTLNSSRGIDTVAPVDWGTKNGWYVDLT
VSSKERVHLDGVQLASGVLAFASTVPTADACSQGGVSYLYQFDLTNGNVLGTSSFTTMIV
GLNRVMSINGKVSAIVTTQDQKTTLTAGGGGSVSPGNTVKRSSWRELTD
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccgccccacaagccctgcagcgcgcggcgcccggctcacatcgaaggccggg
ccacgggccctgcgcagcccgatcctgtccgccgtgctgctggtgctgctgggcagcacc
tgggccgccacgcccgacatctcgaacgtgccgctgagctcgacgtcgaccacgacggcc
aagcccaacatcatgttcatcctcgacgactcgggctcgatggcctgggacttcatgccc
gacgagctcgacgacaacaacgaccaggtcggcgacaacgtctacggcttcaggtcggcg
caatgcaacggcgtggcctacaaccccgacatcacgtacaccccaccggtccggatcgac
ccgaccaccggcgcggtcagcaactacgccgacgccagcttcacggcggcgcgctcggac
ggcttcagcacctcatcgggtgtcacagatctgacgggccgcgtctactaccactacctc
ggcagcgagcccgcgctgtcgtggcgctacggcagcaacggcacggtcgacaggaccacc
acgttcttcaccgagtgcatgaccgcgatccccgctgacggggccggcaacgcgcgcttc
gaacagcgcacgatgagcaacgcatcgaccgatgcacagaactacgccaactggtattcc
tactaccgcaagcgccagctgaccatgcgctcggcggcaggccgggcctttgccgacctg
tcgaatgcctaccgcgtcggcttcaccaggatcagccagacgggtgtcaccggcaccagc
ttcctgaacgtcggcgacttcgacacggcacagaaaaccagcttcttcaacctgctctac
accagcggcatcagcggcagcacgcccttgcgcggcgcactctccaaggtcgggcgctac
tacggcaacgtgatcgccggccagaccgacccggtgcagtactcgtgccagcgcaactac
gccgtgctgtccaccgatggttactggaacaccggaaacgagagcaccacctaccgggcg
ctggcgctcgacggcaccacgctcgtcggccagcaggacggcaccgaagtccggccgatg
aaggacggcagcaccgtgaccgtcacgcgcgtgacgatctcgggctcggtcgaccgcacg
cagacgatcctggatcggcgcaccgacatcacgctgcggcgcaccgccaacaccatcacc
aacaacagctgcaactccggcaacggccggcgcgtctcccagcagggtcagcgccggatc
gacaccgcatcgttccagcgcacgctcgtccaggacgtcaccaaccggaccaccgtcacg
caggtgaccaccaacggcatccccgccaacccgacctcgaccaccacggccaacgccgcg
caggtcagcgcgaccgacggcagcgtcacggccacgaccaccggcacctggaacaacaac
ggcggctcgaacaccaactgcattgcccggtcgagcctgccgaccggctggagcaccggc
acggtgtactacacaccgggcgtcgacggcaccgagctgagccgcaacacggtcaccctc
gccaccggcacgccgaccgtgctgagcacgggccccctggccgacgccggcacgacggag
accaccgccaccaccgccggcgacagcaactcgctggccgacatcgcccagtactactgg
aagaccgacctgcgccccgacatggtcgacaacgtgcccaccagcggtgacgacagcgca
gcgcaccagcacatgaccaccttcacgatcggcctcggcctgaagggcacgctcagctac
gaccgcaactacctgacgcagaccaccggcgacttcgccgatctgcgcagcggcgcgaag
aactggccggtgccacgcggcaccaccggcggcagcgaaaacgccacccacatcgacgac
ctctggcacgccggcgtcaacggccgcggccagtacttctcggcggccgatccgaaccag
ctcgacgacgccatctcgaccaccctgagcgcgatccgtcgggtgaccgaatccggcgca
gcggcggccgccagcacgctcacgcccgtgaccggcgacgactgggtcttcctgcccagc
ttcaccacgatcgactggaccggcgacctgcgcgccttcaagttcaccttcaacagcgcc
aatgaactggtcgcgcccaacaccgccgccggcaacgagatctggagcgccggcaaccag
ctgcgggcgcgcacatcgtcacgccgcatcctgttcaacaacgcgggcacgctcggggac
ttcacctacgacaacctgaccgcggccggccagggcgcgctgttcgacaaccgctgcggc
agcgccctgagctcgcccgcgaccaacctgagccagtgcgccaccctgacccccgccgca
ctggccaaggtcacgggggccaatctggtcaacttcctggccggtgacgccacgctctac
cagagcgccgccgatgtcgacaaccaggtcttccgcacccgcaacgggctgctgggcgac
ttcgtcaacgcctcgccggtgtatgtgggcaagccgccgttccgctacgcggacgccgac
tacgccagcttcgtcagcgcacaggccaaccggaccaaggtggtctacgccgccgccaac
gacggcatgctgcacgccttcaaggtcggcaccggcgccggcgacggcaccggcggtgcc
gagctgtgggccttcgtgccgagcgcggtgatgcccgagatgtggcgcctggccagcgaa
agctacgacaccgaccaccgcttcttcgtcgacgccacgcccaacgtctcggacatctac
gacagcgccgccggacgctggcgcaccatcctggtcggcggcctcggtgcgggcgggcgc
agctactacgcgctcgacgtgacgacgccggagtctcccgtgctgctgtgggaattcagc
gacgccaacctcggcctcacctacggcaacccggtggtcacgaaggatgcgacgggcacc
tgggtggtggtgttcacctccggcctcaacaacaacgccggctccggcgacggcgtcggc
cgcctctacgtggtcaacgccgtgaccggcgcgctggtccgcacggtcgccaccagcgcc
ggcgatgtcggcacccccagcaacctgggccgcctgaacgcctggatcaacgccgactcc
gacaacacggcgctgcgtttctacgccggcgacatgctcggcaacgtctggcgcttcgac
cacgacgaccgcctggccccggccggccgtgaagccgtgctgctgggcaaggcccagagc
gccgacggcacggcccagccgatcaccggcaagctggtgctgaccgaagccagcatcaac
ggcctgcagacgccggtggtgagcttcggcaccggccgcctgctcaatctcgatgacctc
accaacaccaccctgcaaagcatctactcgatcaaggacaccctcggcgaaaccggcgtg
ggcgtgttgcgcgacaccggcgccgccctggtgcagcagaccctcaacagcagccgcggc
atcgacaccgtcgcgccggtggactggggcacgaagaacggctggtacgtcgacctcacg
gtgtcgagcaaggagcgcgtgcacctcgacggcgtgcagctggcctcgggcgtgctggcc
ttcgcctccaccgtgccgaccgccgacgcctgctcgcaaggcggcgtctcctacctctac
cagttcgacctgaccaacggcaacgtgctcggcacgtcgtcgttcaccaccatgatcgtc
ggcctgaaccgggtcatgagcatcaacggcaaggtcagcgccatcgtgaccacgcaggac
cagaagaccacgctgacggccggcggcggcggctcggtgtcgccgggcaacaccgtcaag
cgctcgtcgtggcgcgaactgacggactga
DBGET
integrated database retrieval system
