Leptothrix cholodnii: Lcho_2995
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Entry
Lcho_2995 CDS
T00681
Name
(GenBank) protein of unknown function RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
lch
Leptothrix cholodnii
Pathway
lch03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Lcho_2995
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lch01001
]
Lcho_2995
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lch03009
]
Lcho_2995
Enzymes [BR:
lch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
Lcho_2995
Protein kinases [BR:
lch01001
]
Serine/threonine kinases: Other
RIO family [OT]
Lcho_2995
Ribosome biogenesis [BR:
lch03009
]
Eukaryotic type
Pre-40S particles
Kinases
Lcho_2995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
YrbL-PhoP_reg
TCAD9
Kdo
Pkinase
Motif
Other DBs
NCBI-ProteinID:
ACB35257
UniProt:
B1XZ87
LinkDB
All DBs
Position
complement(3299215..3300063)
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AA seq
282 aa
AA seq
DB search
MKAPKRLQSLVDEGLIDTVVRQLMSGKEAMVYVVRCGDDTRCAKIYKEATHRSFRQAVDY
TENRKVKNTRQARAMAKGSKFGREKQEEAWQSAEVDALYRLAGAGVRVPKPYNFHDGVLL
MELVTDENGDAAPRLNDVVFTPEDARRHHATLIAEVVRMLGAGVVHGDLSEFNILLALDG
PVIIDLPQAVDAAGNNHAQRMLLRDVDNLRGFFGRFAPELLRTEYGHEIWELFQRGELHP
DTPLTGRFKHKAGAVDLGSVLREIDDARDEEAARRLRLQTTQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgcccaagcggctgcagtcgctggtcgacgaaggcctgatcgacacggtggtg
cgccagctcatgagcggcaaggaggcgatggtctacgtggtgcgttgcggcgacgacacg
cgctgcgccaagatctacaaggaagccacccaccgcagcttccgccaggcggtcgactac
accgagaaccgcaaggtcaagaacacccgccaggcccgcgcgatggccaagggcagcaag
ttcggccgcgagaagcaggaagaggcctggcagagcgccgaggtcgacgcgctctaccgc
ctggccggcgcgggcgtgcgggtgcccaagccgtacaacttccatgacggcgtgctgctg
atggagctggtgaccgatgaaaacggcgacgccgcgccgcgcctgaacgacgtcgtcttc
acgcccgaagacgcgcgccgccaccacgccacgctgatcgccgaggtggtgcgcatgctc
ggcgcgggggtggtgcacggcgacctgtcggagttcaacatcctgctcgcgctcgacggg
ccggtgatcatcgacctgccgcaggcggtcgacgcggccggcaacaaccacgcccagcgc
atgctgctgcgcgacgtcgacaacctgcgcggtttcttcggccgcttcgcacccgagctg
ctgcgcaccgaatacggccacgagatctgggagctgttccagcgcggcgaactgcacccc
gacacgccgctgaccggccgcttcaagcacaaggccggcgcggtcgacctgggcagcgtg
ctgcgcgagatcgacgacgcgcgcgacgaagaggcggctcgccgcttgcggctgcagacg
acgcagtag
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