Leptothrix cholodnii: Lcho_3025
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Entry
Lcho_3025 CDS
T00681
Name
(GenBank) inner-membrane translocator
KO
K23535
general nucleoside transport system permease protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lcho_3025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3025
Transporters [BR:
lch02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
Lcho_3025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ACB35285
UniProt:
B1XZB5
LinkDB
All DBs
Position
complement(3344019..3345131)
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AA seq
370 aa
AA seq
DB search
MSSISIPASAPITAPSPVALKVRAMFDALLPAGAALLLTVLLFSLAVALAGFNPGEVWSL
IFLGGFGDAFAWQNTLQRAAPLLLTGLAVALPAQAGRVIIGAEGALVLGGLVASAFGNVL
ADAKVPALIVWPAMALAGALAGGIWIGGVGWLRERREVNETIASLLMSFIAIALFNQCVE
TVLRDPASLNKPSTRTLPEALMLPPMPGLDVHWGLAVGIVVALIAWGVMRLTPLGLALRI
AGGNPRAALGVGLPVAWLTVGACVAGGACAGLAGAVEVAAVHGAANVSLVAGYGYSGILI
AFAARFSPGGVIPVAILVGGIAASGSLLQRRLGLPDASVTVLLGFAFVALIGCETLRGRT
FTLRRGARKG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatctcgatcccggccagcgcgccgatcacggcgccgtcgccggtcgcgctg
aaagtgcgtgcgatgttcgacgcgctgctgccagccggcgccgcgctgttgctcacggtg
ctgctgttttcgctggcggtggcgctggcgggcttcaatccgggcgaggtctggtcgttg
atcttcctcggcggtttcggcgacgcttttgcgtggcagaacacgctgcagcgcgccgcg
ccgctgctgctcaccggcctcgcggtggcgctgccggcgcaggccgggcgcgtgatcatc
ggcgccgaaggggcgttggtgcttggcgggctggtggcgtcggccttcggcaacgtgctg
gccgatgcgaaggtgccggcactgatcgtctggccggcgatggcgctggccggggcgctg
gccggtggcatctggatcggcggggtcggctggctgcgcgagcggcgcgaggtcaacgag
accatcgccagcctgctgatgtcgttcatcgccatcgcgctgttcaaccagtgtgtcgag
acggtgctgcgcgacccggccagcttgaacaagccttcgacgcgcacgctgcccgaggcg
ctgatgctgccgccgatgcccgggctggacgtgcactggggcctggcggtcggcatcgtg
gtggcgctgatcgcctggggcgtgatgcgattgacgccgctgggcctggcgctgcgcatc
gccggtggcaacccgcgtgcggctctcggcgtcggcctgccggtggcgtggctgacggtc
ggcgcctgcgtggccggtggtgcctgtgccggcctggcgggtgcggtcgaagtggcggcg
gtacacggcgcggccaacgtgtcgctggtggcgggttacggctacagcggcatcctgatc
gcgttcgcggcgcgcttctcgccgggtggtgtgatcccggtggcgatcctggtcggcggc
atcgccgccagcggcagcttgctgcaacgccggctcggcctgcccgatgcgtcggtcacg
gtgctgctgggcttcgccttcgtcgcgctgatcggctgcgagacattgcgcggccgcacg
ttcactctgcgccgcggcgctcggaaaggttga
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