Leptothrix cholodnii: Lcho_3065
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Entry
Lcho_3065 CDS
T00681
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00020
Citrate cycle (TCA cycle)
lch00620
Pyruvate metabolism
lch00720
Other carbon fixation pathways
lch01100
Metabolic pathways
lch01110
Biosynthesis of secondary metabolites
lch01120
Microbial metabolism in diverse environments
lch01200
Carbon metabolism
Module
lch_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lch_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Lcho_3065
00620 Pyruvate metabolism
Lcho_3065
09102 Energy metabolism
00720 Other carbon fixation pathways
Lcho_3065
Enzymes [BR:
lch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Lcho_3065
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
ACB35325
UniProt:
B1Y044
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All DBs
Position
3391075..3392601
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AA seq
508 aa
AA seq
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MTTTIRQADLIESVAAALQYISYYHPADYIAHLARAYEREASPAAKDAIAQILTNSKMCA
EGHRPICQDTGIVNVFLKIGMDVKWEGFTGSIADAVNAGVRQGYLNPDNVLRASVLDDPI
FARKNTKDNTPAVIHMELVPGNTVDVIVAAKGGGSENKSKMYMLNPSDNIVDWVLKTVPT
MGAGWCPPGMLGIGVGGTAEKAVMMAKEALMEDIDMYELLERGPQNKLEELRIELYEKVN
ALGIGAQGLGGLTTVLDVKIKTFATHAASKPIAMIPNCAATRHGHFVLDGSGPAYMEPPS
LDLWPNVAWAPDYNKSKRVDLNTLTKAEVASWKPGDTLLLNGKMLTGRDAAHKRINDMLA
KGEPLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDGFTRMMLEKTGLISMVGKAE
RGPVAIQAIKDNQSAYLMAVGGAAYLVAKAIKGAKVVGFADLGMEAIYEFDVKDMPVTVA
VDASGTSVHNTGPKEWQARIGKIPVVEA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccatccgccaggccgacctgatcgaaagcgtcgccgccgccctgcagtac
atcagctactaccacccggccgactacatcgcccacctggcgcgcgcctacgagcgcgag
gcctcgccggccgccaaggatgcgatcgcgcagatcctgaccaactcgaagatgtgcgcc
gaaggccatcggccgatctgccaggacaccggcatcgtcaacgtgttcctgaagatcggc
atggacgtcaagtgggagggtttcaccggctcgatcgccgacgctgtcaacgccggcgtg
cgccagggttacctgaaccccgacaacgtgctgcgcgcctcggtgctcgacgatccgatc
tttgcccgcaagaacaccaaggacaacacgccggccgtgatccacatggagctggtgccg
ggcaacacggtcgacgtgatcgtggcggccaagggcggtggcagcgagaacaagtcgaag
atgtacatgctcaacccgagcgacaacatcgtcgactgggtgctcaagaccgtgccgacg
atgggcgcgggctggtgtccgccgggcatgctgggcatcggcgtgggcggtacggccgag
aaggccgtgatgatggccaaggaagcgttgatggaagacatcgacatgtacgagcttctg
gaacgcggcccgcagaacaagctcgaagagctgcgcatcgagctgtacgagaaggtcaac
gcgctgggcatcggcgcccaaggcctgggcggcctgaccaccgtgctggacgtcaagatc
aagaccttcgcgacccacgcggccagcaagccgatcgcgatgatccccaactgcgccgcc
acccgccacggccacttcgtgctcgacggttccggcccggcctacatggagccgccgagc
ctcgacctgtggcccaacgtggcctgggcgcccgactacaacaagagcaagcgcgtcgat
ctcaacacgctgaccaaggccgaagtggcgagctggaagccgggcgacacgctgctgctc
aacggcaagatgctgaccggccgcgacgctgcccacaagcgcatcaacgacatgctggcc
aagggcgagccgctgccggtggacttcacgaaccgcgtcatctactacgtcggcccggtc
gatccggtgcgtgacgaggtcgtcggcccggccggcccgaccaccgccacccgcatggac
ggcttcacccgcatgatgctggagaagaccggcctgatctcgatggtcggcaaggccgag
cgcggcccggtggcgatccaggcgatcaaggacaaccagagcgcgtacctgatggccgtg
ggcggcgccgcctacctggtcgccaaggcgatcaagggcgcgaaggtcgtcggctttgcc
gacctcggcatggaagcgatctacgagttcgacgtcaaggacatgccggtgacggtggcg
gtcgacgccagcggcaccagcgtgcacaacaccgggccgaaggaatggcaggcccgcatc
ggcaagatcccggtcgtcgaagcctga
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