Leptothrix cholodnii: Lcho_3161
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Entry
Lcho_3161 CDS
T00681
Name
(GenBank) surface antigen (D15)
KO
K07278
translocation and assembly module TamA
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3161
Transporters [BR:
lch02000
]
Other transporters
Pores ion channels [TC:
1
]
Lcho_3161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_TamA_1
Omp85_2
Motif
Other DBs
NCBI-ProteinID:
ACB35421
UniProt:
B1Y104
LinkDB
All DBs
Position
3488860..3490800
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AA seq
646 aa
AA seq
DB search
MSRRWFAGLGAGLCLSLGALAQEAPAGTTPQDGNAAGTLLERAAPGAAGGDDAAAAAEQR
SVTWQLRIDAPDNLRTLLARYLDLARFQPMAASERITRVELARLLAAAPQQARGLLETVG
YFNARITSQTTGGETATPPADPARPIDLQITLTVEPGPQTTVGQVRLEIEGPLSETGDSG
DAASRALIERMRAGWTLPAGQPYTQSAWSAAKAAVLVAARAEGYALATLSGSVAQVDAPA
NRADLFMVLDSGPLFRFGDLKFEGLNHVRPDALRAMVTFTPGEPLREQLLLDYQDRLVKS
SLFDTVAVLFEPDADQAGAMPVTVRVHELALQQATFGVGASDTTGPRITVEHLHQQVFDL
GWQAKSRLQLGRDTQSASVDLTSHPHPGPYRNLASAAVDRTEASGLRVTSERVRLGRTQD
TEKVERLYFVEWQRALTRNVADGILTDDSSAVTLNYHWIWRRLDDPILPTRGYSLSAETA
VGRSFASTDSSGFFGRAAGRLTGYWPLGQSWYGQARVQLGQVYARDAVAVPFTLLFRAGG
DDSVRGYGYQTLGPSSAGNGSAVGGRVVGTGSIELARPFSRNLPAWWWGVFLDGGNAAAR
WEDFSTVYGYGLGLRWRSPVGPLRIDLAYADELRKMRLHFSVGVTF
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
gtgagccggcgctggttcgcggggctcggcgcaggtctgtgcctgagcctgggggccctg
gcgcaggaagcgcccgccggcaccacgcctcaggacggcaacgcggcgggcaccttgcta
gaacgcgcggcgccgggtgcggccggtggcgacgacgccgctgctgcggccgaacagcgc
tcggtgacctggcagctgcgcatcgatgcgcccgacaacctgcgcacgctgctcgcgcgc
tacctcgacctggcgcggttccagccgatggcggcgtccgagcgcatcacccgggtcgag
ctggcgcgcctgctggccgcggcgccgcaacaggcgcgcggcctgctcgagaccgtgggc
tatttcaacgcccgcatcacctcgcagaccacgggcggtgaaacggccaccccaccggcc
gatccggcgcggccgatcgacctgcagatcacgctgacggtcgagcccggcccgcagacc
acggtcggccaggtgcggctggagatcgaagggccgctgtccgaaaccggcgactcgggc
gatgcggcatcgcgcgcgctgatcgagcgcatgcgcgccggctggacgctgcccgcgggc
cagccctacacccagtccgcctggtcggccgccaaggccgcggtgctggtggccgcacgc
gccgagggctacgcgctggccacgctgagcggcagcgtcgcgcaggtcgacgccccggcc
aaccgcgccgacctgttcatggtgctcgacagcggcccgctgttccgcttcggcgacctg
aagttcgagggcctgaaccacgtccggcccgatgccctgcgggcgatggtgacgttcacg
cccggcgagccgctgcgcgagcagctgctgctcgactaccaggaccgcctcgtcaagtcg
agcctgttcgacaccgtggcggtgctgttcgagcccgacgccgaccaggccggcgcgatg
ccggtgacggtgcgggtgcacgaactggcgctgcagcaggccacgttcggtgtcggtgcc
tccgacaccaccggcccgcgcatcacggtcgaacacctgcaccagcaggtcttcgacctc
ggctggcaggccaagagccgcctgcagctgggccgcgacacgcagtcggcatcggtcgac
ctgacctcgcatccgcaccccggcccgtaccgcaacctggccagcgcggcggtcgaccgc
accgaggccagcggcctgcgcgtcaccagcgagcgcgtgcggctgggccgcacgcaggac
accgagaaggtcgagcggctgtatttcgtcgagtggcagcgcgcgctgacccgcaacgtc
gccgacggcatcctgaccgacgactcgtcggccgtcacgctcaactaccactggatctgg
cgccggctcgacgacccgatcctgcccacccgcggctacagcctgtcggccgagacggcg
gtcggccgctcgttcgccagcaccgacagcagcggcttcttcggccgtgccgccggccgc
ctgaccggctactggccgctcggccagtcgtggtacggccaggcacgggtgcagctcggc
caggtctacgcacgcgacgcggtggcggtgccgttcaccttgctgttccgtgccggcggc
gacgactcggtgcgcggctacggctaccagacgctcggcccgagctcggccggcaacggc
agcgcggtcggcggccgggtggtcggcaccggcagcatcgagctcgcccggcccttcagc
cgcaacctgccggcctggtggtggggcgtgtttctcgacggcggcaacgcggccgcgcgc
tgggaggacttcagcaccgtctacggctacggcctgggcctgcgctggcgcagcccggtc
gggccgctgcgcatcgacctggcctatgccgacgagctgcgcaagatgcgcctgcatttc
agcgtcggcgtgacgttctga
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