Leptothrix cholodnii: Lcho_3162
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Entry
Lcho_3162 CDS
T00681
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3162
Transporters [BR:
lch02000
]
Other transporters
Pores ion channels [TC:
1
]
Lcho_3162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ACB35422
UniProt:
B1Y105
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All DBs
Position
3490803..3495164
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AA seq
1453 aa
AA seq
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MSDTDSPIRPPTPARRHPARWLGAALLLAVLTLAALISLPFSATGTRWLLAGLQHGIGLE
VQASRGALLGGDFSAQRLRYALSPTQTLLIEQPAWQGLRWQRPAGGPPLGHLHLQRLSAA
RIDLQGASADTQPLRLPTALSLPMAIDIEAIAVGELVLDAIRERPVHDLAVQRLSLGAGS
AGRHRLDALSLQWDRIALQGRAELAAQPPVLQAQAQLQPRPDAVGSATAGTAPGVPADWR
VTLQAQGPLADLALQAGLSARGQSLQADARLRLEEAMPLSQLQAQLEALDLAPLASGLPH
TALSGAIDLQLDARGTGPAAQPLSARASLRNDAAGALAAGRIPLQAVELTAHGDLRAPDR
GRVDTLQLTLGTRQEPAGSVSASGSWALVGQGAARRIDIDLEARVADLRPQRLHPASPAL
HIGGPLAWQLSQPLPAAGAAAPAAGFETRLRTRLTGRLIGASLPAVTLALDAKADPGRLQ
VDNLQADAGGARLSGKGSVVRRNGNLLLDWSSSLQAFDPALWWPRPAPRSEPGTLDRLLA
AGPHELNGQLGARLQWPAKAPRSIDGLAQLRGQAQFDLQPSRLAGLGLSGQWQLNAIPSA
ASAQPHVDTRLALQLGPGTAATTLSLQGVLDPVGSRDQWQLAWNSADLAQLAPWLRLLQP
DQPPELDGRSDGQAQFDGRWPHMRSNGRVNLPALGWRGADRRLAVQDLSGSWRVGSGADD
PLEVDARLERADLGGWQLRGLTVKTRGSAAAHRLRAELAELAPGGTAATVATGATKPDGN
GNGSRAMPPLAGLIEAGGALEHDFGRSLVGWRGRIEQFELREKTLATAVGAAASTPSGPA
APSGFTRPVRLVLDPTTLNLTHSPATTTVTLGATRLHLSELHLALQQFAWQQDRSGEHSA
DRLALQGRLDAIDVAPLLRRAQPDFGWGGDLRIGGSIDVQATPENFRLAASLQRDSGDLQ
VTDPDDPRNPQRLGLVDLRLGLSAHDGNWRLTQTISGGNLGRLEGEQGLTAPPAAMWPPA
SAAVAGKIDLQVAQLGNWGRWLPAGWRLSGQLGTEARIAGQLGAPELSGELVGRNLAVRN
LLQGVDWHDAQLRVRLDGSTARVETASVRAGDGQLSATGEIALGAAPRLDLNVSADRFAV
LQRVDRRVVASGSARLLLDATSTMLTGEVRADEGRIDFSQSDAPSLADDVDVQRPEDAAA
RERAAAAARSQRRTVLDLRADLGPAFTLKGRGLATRLAGELRLTSPANKLAINGVIRAED
GNYAAYGQKLQVDRGLITFIGAADNPRLDIEATRPDLEDVRVGVIVTGTAQAPRVRLFSE
PAMSDTDRLSWLLLGRASDGLGRTDLALLQRAAYALLAGESDSPSIVERIGLDQLSVRQN
DTGDTRETVVSLGKQLSRRWYVGYERSLNAAAGTWQLIYRAAQRFTLRAQSGTENALDLI
WTWKWDDSGTRVD
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccgactcaccgatccgcccgcccacgccggcccgccgccacccggcgcgc
tggctcggcgcggcactgctgctggccgtgctgacgctggccgcgctgatcagcctgccg
ttcagcgccaccggcacgcgctggctgctggcgggactgcagcacggcatcggcctggag
gtccaggccagccgcggcgcgctgctgggcggcgatttttcggcgcagcggctgcgttat
gcgctgtcgccgacgcagacgctgctgatcgagcagccggcctggcagggcctgcgctgg
cagcgcccggccggcgggccgccgctgggccacctccacctgcagcgcctgagcgccgcg
cgcatcgacctgcaaggcgcctccgccgacacgcagccgctgcgcctgccgaccgcgctg
agcctgccgatggcgatcgacatcgaggccatcgccgtcggcgagctggtgctcgacgcc
atccgcgaacggccggtgcacgacctggccgtgcagcgcctgagcctgggcgcgggcagc
gccggccggcatcggctcgacgccctgagcctgcaatgggaccgcatcgcgctgcagggc
cgggccgagctggcggcgcaaccgccggtgctgcaggcgcaggcccagctgcagccgcgc
ccggatgccgtcggcagcgcaacggccggcaccgcgcccggcgttccggccgactggcgg
gtcacgctgcaggcgcagggcccgctcgccgacctggcgctgcaggccggcctgagcgcg
cgcggccagtcgctgcaggcggatgcgcggctgcggctcgaagaggcgatgccgctgtcg
cagctgcaggcgcagctcgaggcgctcgacctcgcgccgctcgccagcggcctgccgcac
accgcgctcagcggcgcgatcgacctgcagctcgatgcccgcggcaccggccccgccgcc
cagccgctgtcggcccgggcctcgctgcgcaacgacgccgcaggcgcgctggcggccggc
cgcatcccgctgcaagcggtcgagctgaccgcacacggcgacctgcgcgcacccgaccgg
ggccgggtcgacacgctgcagctcacgctcggtacccggcaggaaccggccggcagcgtc
agcgccagcggcagctgggcgctggtcggacagggcgcggcccggcgcatcgacatcgac
ctcgaagcccgcgtcgccgacctgcgcccgcagcgcctgcacccggccagcccggcgctg
cacatcggcggcccgctggcctggcagctgagccagccgctgccggcggccggcgccgct
gccccggccgccggtttcgagacccgcctgcgcacgcgcctgaccggccggctgatcggc
gccagcctgccggcggtgacgctggcgctcgatgccaaggccgatccgggccggctgcag
gtcgacaacctgcaggccgacgcgggtggcgcccggctgtcgggcaagggcagcgtggtg
cgccgcaacggcaacctgctgctcgactggtcgagcagcctgcaggctttcgacccggcg
ctgtggtggccacggccggcgccgcggtccgagcccggcacgctcgaccggctgctggcg
gccgggccgcacgaactcaacggccagctcggcgcccggctgcagtggcccgccaaggcg
ccgcgcagcatcgacgggctggcgcagctgcgcggccaggcgcagttcgacctgcaaccg
agccggctggccggcctgggcctgagcgggcaatggcagctcaacgccatcccgagcgcc
gcgtcggcgcagccgcatgtcgacacccgcctggccttgcagctcggcccgggcacggcg
gcgaccacgctgtcgctgcaaggcgtgctcgatccggtcggcagccgcgaccagtggcag
ctggcctggaacagcgccgacctggcccagctggcgccctggctgcggctgctgcagccg
gaccaaccgcccgaactcgacggccgcagcgacggccaggcgcagttcgacggccgctgg
ccgcacatgcgcagcaacggccgcgtcaacctgccggcgctgggctggcgcggcgccgac
cgccgcctcgccgtgcaggacctgagcggcagctggcgcgtcggcagcggcgcagacgat
ccgctcgaggtcgacgcccggctcgagcgcgccgacctcggcggctggcagctgcgcggc
ctgaccgtgaagacccgcggcagcgccgccgcgcaccgactgcgggcggagctggccgaa
ctggcccccggcggcacggcggcgaccgtggccaccggcgccaccaagcccgacggcaac
ggcaacggcagccgcgcgatgccgccgctggccggcctgatcgaagccggcggcgccctc
gaacacgacttcgggcggtcgctggtgggctggcgcggccggatcgagcagttcgagctg
cgcgaaaaaaccctcgccaccgcggtcggtgcggccgccagcacgccgagcggcccggcc
gcgccgagcgggttcacccggccggtgcggctggtgctcgaccccacgacgctgaacctg
acgcactcgcccgcgaccaccaccgtgacgctgggcgccacgcggctgcacctgagcgag
ctgcacctggcgctgcagcagttcgcctggcagcaggaccgcagtggcgagcacagcgcc
gaccggctggcgctgcagggccggctcgacgccatcgacgtggcgccgctgctgcggcgc
gcccagcccgatttcggctggggcggcgacctgcgcatcggcggcagcatcgacgtgcag
gccacgcccgagaacttcaggctcgccgccagcctgcagcgcgacagcggtgacctgcag
gtcaccgaccccgacgaccccaggaacccgcagcgcctgggcctggtcgacctgcggctg
ggcctgtcggcgcatgacggcaactggcgcctgacgcagaccatcagcggcggcaacctc
ggccggctcgaaggcgaacagggcctgacggcgccgcccgcggcgatgtggccgccggcc
agcgccgcggtcgccggcaagatcgacctgcaggtcgcgcagctcggcaactggggccgc
tggctgccggcgggctggcggctgtcgggccagctcggcaccgaggcgcgcatcgccggc
cagctcggcgcgcccgagctgagcggcgagctggtcggccgcaacctcgcggtgcgcaac
ctgctgcagggcgtcgactggcacgacgcacagctgcgcgtgcgcctggacggcagcacc
gcgcgggtcgagaccgccagcgtgcgcgccggtgacggccagctcagcgccaccggcgag
atcgcgctcggcgccgcgccacggctcgacctgaacgtcagcgccgaccgtttcgcggtg
ctgcagcgggtcgaccggcgggtggtcgccagcggcagcgcgcggctgctgctcgatgcc
acgtcgacgatgctgaccggcgaggtgcgtgccgacgaaggccgcatcgacttcagccag
agcgacgcgcccagcctggccgacgacgtcgacgtgcagcgccccgaagacgcggccgcg
cgcgaacgcgccgccgcggctgcgcgcagccagcgccgcaccgtgctcgacctgcgcgcc
gacctcggcccggccttcacgctcaagggccgcggcctggccacccggctggccggcgag
ctgcgcctgaccagcccggccaacaagctggcgatcaacggcgtgatccgcgccgaggac
ggcaactacgccgcctacggtcagaagctgcaggtcgaccgcggcctgatcaccttcatc
ggcgcggccgacaacccgcgcctggacatcgaggccacccgccccgatctcgaagacgtg
cgggtcggcgtgatcgtcaccggcaccgcccaggcgccgcgcgtgcggctgttcagcgag
cccgccatgagcgacaccgaccggctgtcgtggctgctgctcgggcgcgcctccgacggc
ctgggccgcaccgacctggcgctgctgcagcgcgccgcctacgcgctgctggccggcgag
agcgactcgccatcgatcgtcgagcgcatcgggctcgatcagctgtcggtgcgccagaac
gacaccggcgacacccgcgagaccgtcgtctcgctgggcaagcagctcagccggcgctgg
tacgtgggctacgaacgcagcctcaacgccgccgccggcacctggcagctgatctaccgc
gccgcccagcgcttcacgctgcgagcccagtcgggcaccgaaaacgcgctcgacctgatc
tggacctggaagtgggacgacagcggcacgcgggtcgactga
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