Leptothrix cholodnii: Lcho_3220
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Entry
Lcho_3220 CDS
T00681
Name
(GenBank) TRAP dicarboxylate transporter, DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lcho_3220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3220
Transporters [BR:
lch02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Lcho_3220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ACB35478
UniProt:
B1Y1L6
LinkDB
All DBs
Position
complement(3569643..3570617)
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AA seq
324 aa
AA seq
DB search
MKLKPLSTALLLASLCVSGSAWAQQQSMRLAHGLNDKHPVHLAMVRFAELAKQKSNGEID
IKVFPNGTLGGERETLEQVQNGVLELTKASASPLETFAPEYKVFNLPFVFRSKEHFFKVL
DGQVGESILAASKSRGFIGLTFYDSGSRSFYAKKPINTPDDLKGLKIRVQQSPTTIKMVQ
ALGAAPTPMAWGEVYPALQSGVVDGAENNITALTTGRHGEVSKFYSMTEHQMVPDVLVIS
SAKWDSLKKPQQDALRQAAHESFVYQRGLWAEAEKTEAVAAEKLGVKISMPNKQAFIDKV
KPMLDEERKNARVSGLLDQINAVR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaagcccctttccaccgccctgctgctggccagtctgtgcgtttccggcagc
gcctgggcgcagcagcagtcgatgcgtctggcccacggcctgaacgacaagcacccggtg
cacctcgcgatggtgcggttcgccgaactcgccaagcagaagtccaacggcgagatcgac
atcaaggtgttccccaacggcaccctgggcggcgagcgcgagacgctcgagcaggtgcag
aacggcgtgctcgaactgaccaaggccagcgcctcgccgctcgagaccttcgcgcccgag
tacaaggtcttcaacctgccgttcgtgtttcgcagcaaggagcatttcttcaaggtgctc
gacggccaggtcggcgagtcgatcctggccgcttccaagagccgcggcttcatcggcctg
accttctacgactcgggctcgcgcagcttctacgccaagaagccgatcaacacgcccgat
gacctgaagggcctgaagatccgcgtccagcagagcccgaccaccatcaagatggtccag
gcgctgggtgccgcacccacgccgatggcctggggcgaggtctacccggcgctgcagtcg
ggtgtggtcgacggcgccgagaacaacatcaccgcgctgaccaccggccgccatggcgag
gtgagcaagttctactcgatgaccgagcaccagatggtgcccgacgtgctggtgatctcg
tcggccaagtgggactccctgaagaagccgcagcaggatgcgctgcgccaggccgcgcac
gagtccttcgtctaccagcgcggcctgtgggccgaggccgagaagaccgaggcggtcgcg
gccgagaagctgggcgtgaagatcagcatgcccaacaagcaggcgttcatcgacaaggtc
aagccgatgctggacgaggagcgcaagaacgcccgcgtgtccggtctgctcgaccagatc
aacgcggttcgctga
DBGET
integrated database retrieval system
