Leptothrix cholodnii: Lcho_3316
Help
Entry
Lcho_3316 CDS
T00681
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K03335
inosose dehydratase [EC:
4.2.1.44
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00562
Inositol phosphate metabolism
lch01100
Metabolic pathways
lch01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
Lcho_3316
Enzymes [BR:
lch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.44 myo-inosose-2 dehydratase
Lcho_3316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACB35574
UniProt:
B1Y2C1
LinkDB
All DBs
Position
3685020..3685949
Genome browser
AA seq
309 aa
AA seq
DB search
MTWNVRIGINPISWMNDDLPSLGGETLLETALGEGAEIGYEGFELGNKFPKDGPGLKAKL
DEFGVACVSGWYSGFLAETEPGQSNADAVAAEIERARAHMSKLQYNGANVVVYGECAGTV
QGQIDVPVSKRPHFANAALWQAYAERLNAFGAHLIDTYGIKLAYHHHMGAYVESPADVDQ
LMALTDPAKVFLLFDTGHAYFGGAADPVALLKKHLSRVVHVHCKDVRAQVITTARNDGWS
FLNGVINGTFTVPGDGVIDFDAVLTTLKNAGYEGWLVVEAEQDPAVAPSYQYAQKGYRTL
RAIVDRLSA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacctggaacgtgcgcatcggcatcaacccgatctcctggatgaacgacgacctgccc
tcgctgggcggcgagacgctgctcgaaaccgctttgggcgaaggcgccgagatcggctac
gagggcttcgagctcggcaacaagttccccaaggacggcccgggcctgaaggccaagctc
gatgaattcggcgtggcttgcgtgtcgggctggtactcgggtttcctggccgagaccgaa
cccggccagagcaacgccgacgcggtggccgccgagatcgagcgcgcccgcgcccacatg
agcaagctgcagtacaacggcgccaacgtcgtcgtctacggcgaatgcgccggcaccgtg
cagggccagatcgacgtgccggtgtccaagcgcccgcatttcgccaacgccgcgttgtgg
caggcctatgccgagcgcctgaacgcgttcggtgcgcacctgatcgacacctacggcatc
aagctcgcgtaccaccaccacatgggcgcgtacgtcgagtcgcccgccgacgtcgaccag
ctgatggcgctgaccgatccggccaaggtgttcctgctgttcgacaccgggcacgcctac
tttggcggtgcggccgacccggtggcgctgctcaagaagcacctgtcgcgcgtggttcac
gtgcattgcaaggacgtgcgcgcacaggtcatcacgacggcacgcaacgacggctggagc
ttcctgaacggcgtcatcaacggcaccttcaccgtgccgggtgacggcgtgatcgacttc
gacgccgtgctcaccacgctcaagaacgccggctacgaaggctggctggtggtcgaggcc
gagcaggatccggccgtggcgccgagctatcagtacgcgcagaagggctaccgcacgctg
cgcgcgatcgtcgatcggctgagcgcctga
DBGET
integrated database retrieval system
