Leptothrix cholodnii: Lcho_3321
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Entry
Lcho_3321 CDS
T00681
Name
(GenBank) 1,4-alpha-glucan branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00500
Starch and sucrose metabolism
lch01100
Metabolic pathways
lch01110
Biosynthesis of secondary metabolites
Module
lch_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Lcho_3321
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lch04147
]
Lcho_3321
Enzymes [BR:
lch01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Lcho_3321
Exosome [BR:
lch04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Lcho_3321
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgB_N
CBM_48
Alpha-amylase_C
Alpha-amylase
AMPK1_CBM
Motif
Other DBs
NCBI-ProteinID:
ACB35579
UniProt:
B1Y2C6
LinkDB
All DBs
Position
complement(3693125..3695311)
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AA seq
728 aa
AA seq
DB search
MLESSTVTALMAGDHGDPFAVLGLHTHDERWVLRALLPGAVGVDVIDKASGQNVASLRRI
VGSDVFEGTLPEREDRLVYQLDVDWGSHHQVMEDAYRFSTLLGAMDLWLLAEGTHHRPYE
QLGAHPTEIDGVAGTRFAVWAPSARRVSVVGSFNNWDGRRHAMRVRSECGVWEIFVPHVG
PGDLYKYEIKGQDGGLRLKADPVAFRAEMRPQTASVVHGLPPVVPSTEQRRDANALGAAV
SIYEVHLGSWRRNERGEWLDYRQIAEQLIPYAKDMGFTHLELLPVNEHPFDGSWGYQPTG
MYAPTSRFGTPDDFRHFVAQAHEAGLGVILDWVPGHFPTDAHGLGQFDGSHLYEHADPRE
GFHQDWQTLIYNYGRTEVRNFLIGNALYWIERYGIDGLRVDAVASMLYRDYSRKDGEWIP
NQFGGRENLEAIDFMRRMNHIVGTQRPEAITLAEESTAFPGVSRPPAPDLQSGGLGFHYK
WNMGWMNDTLRYMQQDPVHRQYHHGQITFSLVYAFTENFVLPLSHDEVVHGKGSILQRMP
GDEWQRFANLRAYYGFMWGHPGKKLLFMGCEFGQGEEWHAEKGLPWHLLDYPNHAGVQRL
VCDLNTVYRDFPALHQLDFTPDGFGWISHDDAQNSVLSFTRHAADGSFVVVVCNFTPLPR
TGYRIGVPAAGHYRELINTDAAIYGGSGVHNGLLSTEPVASHGREQSLVITVPPLATVMW
VCEGGAAS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagtcctcaaccgtaaccgccctgatggcgggtgatcacggcgatccgttcgcc
gtgctcggtctgcacacacacgacgagcgctgggtgctgcgtgcgctgctgcccggcgcc
gtcggcgtcgacgtgatcgacaaggccagcggccagaacgtggccagcctgcgccgcatc
gtcggctcggacgtgttcgagggcacgctgcccgagcgcgaagaccggctggtctaccag
ctcgacgtcgactggggcagccatcaccaggtgatggaagacgcctaccgcttctcgacc
ctgctcggcgcgatggacctctggctgctggccgaaggcacgcatcaccggccctacgaa
cagctcggcgcgcacccgaccgagatcgacggcgtggccggcacccgctttgccgtctgg
gcgccgagcgcgcggcgcgtgtcggtggtcggcagcttcaacaactgggacggccgccgc
cacgccatgcgcgtgcgcagcgaatgcggcgtgtgggagatcttcgtgccgcacgtcggc
ccgggcgacctctacaagtacgagatcaagggccaggacggcggcctgcggctcaaggcc
gacccggtcgccttccgcgccgaaatgaggccgcagacggcctcggtggtgcacggcctg
ccgcccgtggtgccgagcaccgaacagcgccgcgacgccaacgcgctgggcgcggcggtg
tcgatctacgaggtccacctgggctcgtggcggcgcaacgagcgcggcgaatggctcgac
taccgccagatcgccgagcagctgatcccctacgccaaggacatgggtttcacccacctc
gaactgctgccggtcaacgagcatccgttcgacggttcctggggttatcagcccaccggc
atgtacgcgccgacctcgcgcttcggcacgcccgatgatttccgccacttcgttgcgcag
gcgcacgaggccggcctgggcgtgatcctcgactgggtgccgggccacttcccgaccgac
gcccacggcctgggccagttcgacggcagccacctctacgaacacgccgatccgcgcgaa
ggtttccaccaggactggcagacgctgatctacaactacggccgcacggaggtgcgcaac
ttcctgatcggcaacgcgctgtactggatcgagcgttacggcatcgacggcctgcgcgtc
gatgcggtggcctcgatgctgtaccgcgactacagccgcaaggacggcgagtggatcccc
aaccagttcggcggccgcgagaacctcgaggcgatcgacttcatgcgccgcatgaaccac
atcgtcggcacccagcggcccgaggcgatcacgctggccgaggagtcgaccgccttcccg
ggcgtgtcgcgcccgcccgcccccgatctgcaaagcggcggcctgggtttccactacaag
tggaacatgggctggatgaacgacaccctgcgctacatgcagcaggatccggtgcatcgc
cagtatcaccacggccagatcaccttcagcctggtctacgcctttaccgagaatttcgtg
ctgccgctttcgcacgacgaggtggtgcacggcaagggttcgatcctgcaacgcatgccg
ggcgacgaatggcagcgctttgccaatctgcgcgcctattacggtttcatgtgggggcac
cccggcaagaaactgctgttcatgggctgcgagtttggccagggcgaagaatggcatgcc
gaaaaaggcctgccgtggcatttgctcgattacccgaatcacgccggcgtgcagcgcctg
gtgtgtgacctcaataccgtgtaccgggattttccggcgctgcaccagctcgatttcacg
cccgacggtttcggctggatcagccatgacgatgcgcagaattcggtcctgtcattcacc
cgccatgctgccgacggcagtttcgtggtggtcgtctgcaatttcacgccgctgccgcgc
acgggttatcgcatcggcgtgccggccgccggccattaccgcgagctgatcaataccgac
gccgcgatctacggcggcagcggggtgcacaacggcctcttgagcaccgagccggtggcc
tcgcacggtcgcgagcagtcgctggtgatcaccgtgccgccgctggccaccgtgatgtgg
gtgtgcgagggcggcgctgcttcctga
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