Leptothrix cholodnii: Lcho_3333
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Entry
Lcho_3333 CDS
T00681
Name
(GenBank) transcriptional regulator, LysR family
Organism
lch
Leptothrix cholodnii
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_11
MarR_2
HTH_30
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
ACB35591
UniProt:
B1Y2D8
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Position
3711919..3712863
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AA seq
314 aa
AA seq
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MEARRIDGLWSHMHWLTVLGDLGSYTAAAQRLGVSKAAMSQHIADLERAAGVPLVSRTTR
SVRLTEAGQQLADATRGAFEQIERGLAGVKDLATTPRGLLRVTAPVALGRQQIVPRLPDF
LRAHPEVRIELVLNDQVLSLAQEGFDLAIRHTARPPETHVAWTLTTTRSVLVASPDYLQR
RGRPQHPAELATERGQHDCLHYPRPGETPTWQFQPRQAALAPVTVAVRGPLSANNSEVLR
EAAIDGLGIALLPDFSAQAALRNGALEAVLPQWKPVGSFGEFLFAIRPYSPYVPRAVHAL
VAYLRTTLQAGFGT
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaagccagacgcatcgacggtctgtggtcgcacatgcactggctgacggtgctgggc
gatctgggcagctacaccgccgccgcgcagcgcctgggcgtcagcaaggcggcgatgagc
cagcacatcgccgacctggagcgcgccgccggcgtgccgctggtcagccgcaccacccgc
agcgtgcgcctgaccgaagccggccagcagctcgccgacgccacccgcggcgccttcgag
cagatcgagcgcggcctggccggcgtgaaggacctggccaccacgccgcgcggcctgctg
cgcgtgaccgcgccggtggcgctggggcgccagcagatcgtgccgaggctgccggacttc
ctgcgcgcacatccggaggtgcgcatcgagctggtgctcaacgaccaggtgctgtcgctg
gcacaggagggcttcgacctggcgatccggcacaccgcccggccgcccgaaacccatgtc
gcctggacgctcaccaccacccgctcggtgctggtcgccagccccgactacctgcagcgc
cgcggccgaccgcagcatcccgccgagctcgccaccgaacgcggccagcacgactgcctg
cactacccgcgccccggcgagacgccgacctggcagtttcagccgcggcaggccgcgctc
gcgccggtgacggtggccgtgcgcggcccgctcagcgccaacaacagcgaggtgctgcgc
gaggccgcgatcgacgggctgggcatcgcgctgctgcccgatttcagcgcccaggcggcg
ctgcgcaacggcgcgctcgaggcggtgctgccgcaatggaagccggtcggcagcttcggc
gagttcctgttcgcgatccggccctacagcccctacgtgccacgcgccgtgcacgccctg
gtggcgtacctgcgcaccacgctgcaggcgggtttcggcacctga
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