Leptothrix cholodnii: Lcho_3348
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Entry
Lcho_3348 CDS
T00681
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lch03000
]
Lcho_3348
Transcription factors [BR:
lch03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Lcho_3348
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACB35606
UniProt:
B1Y2F3
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Position
3726004..3726885
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AA seq
293 aa
AA seq
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MLNYRHLHYFWVVTKEGGFARAAERLDMAIQTISAQVRELEKSLGHQLLKPSGRGVALTE
AGQAAFARAEEIFQLGQCIADEVREAASGKVARLAVGLSDGISKLAAHALLEPVLATDNL
RLVCHEGEFEQLLAELALHHLDLVLAGQAAPRNPNLRLVSERLVESPVEWYGPARLVGTT
ERDRFPQSLNDLPVLLPTGHSALRSTLDHWFDTQGLRPRIVGEFEDSALLAVFAARGLGV
FPISSLGASDVGLMQGLHLLGRCDDVKEEIHAIRSRRGQHHPLVLQVIAAARA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgttgaactaccgccatctccattacttctgggtcgtcaccaaggagggcggctttgcc
cgcgccgccgagcggctggacatggccatacagacgatcagcgcgcaggtgcgcgagctg
gagaagtcgctgggccatcaattgctaaagccctcggggcgtggcgtggcccttaccgag
gcgggccaggcggctttcgcgcgtgccgaggagatcttccagctgggccagtgcatcgcc
gacgaggtgcgcgaggcggcaagcggcaaggtggcgaggctggcggtcgggctgtcggac
ggcatttccaagctcgccgcccatgcgctgctggagccggtgctggccaccgacaacctg
cggctggtctgccacgagggagagttcgagcagctgctggccgaactggcactgcaccac
ctcgacctggtgctggccggacaggccgcaccgcgcaatccgaacctgcgcctcgtgagc
gaacggctcgtcgaatcacccgtggagtggtacggcccggccaggctggtcggcacgacc
gagcgcgaccgttttccgcagtcgctgaatgacctgccggtgctgctgcccacagggcac
tcggccctgcgctcgacactggaccactggttcgacacgcagggcctgcggccgcgcatc
gtcggcgagttcgaggacagcgcgctgctggcggtgtttgctgcgcgcgggctgggcgtg
ttcccgatcagcagcctgggtgcgagtgacgtgggcttgatgcagggcctgcacctgctc
gggcgctgcgacgacgtgaaggaggaaatccacgccatccgctcgcgccgcgggcagcat
cacccattggtgctgcaggtgatcgccgcggcgcgcgcctga
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