Leptothrix cholodnii: Lcho_3403
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Entry
Lcho_3403 CDS
T00681
Name
(GenBank) type IV pilus secretin PilQ
KO
K02666
type IV pilus assembly protein PilQ
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lch02044
]
Lcho_3403
02035 Bacterial motility proteins [BR:
lch02035
]
Lcho_3403
Secretion system [BR:
lch02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Lcho_3403
Bacterial motility proteins [BR:
lch02035
]
Pilus system
Pilus assembly proteins
Lcho_3403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
ACB35661
UniProt:
B1Y305
LinkDB
All DBs
Position
complement(3785374..3787554)
Genome browser
AA seq
726 aa
AA seq
DB search
MKYAQEIASMNRWRAPLVALFVATVLPSVAWAQTVIQSITSSQQAGSETIRIELNEPLIN
APRGFVLQTPARIALDLLGVVSGTVRPSQEVNLGNLRSLALAQAGDRTRLVLNLRQATQY
RTEQQGKVLLVILEPVPVAAALATAPSEPVHFSESQNNQPERIRDIDFRRGRDGAGRVVV
DLPSTQVGVDIKQQGQNLVIEFLRSNVPESLVRRLDVTDFGTPVHSISTTQNGDRVRMVV
EPRGSWEHSAYQTDNQFVLEVRPQKVDPQKLTQGPGFTGDKLSLNFQSIEVRSLLQVIAD
FTNFNIVTSDSVTGNVTLRLKDVPWDQALDIIMQAKSLGVKKAGNVLWIAPKDELAAKEK
QELEARKQIADLEPLRTQSFQLNYTKAEEVVKSLTGQQQGSAGTGQGGNVTRILSQRGSA
AYESRTNQLFVSDLPSKLEEVAQMIAKIDVPVRQVMIEARIVEAEDSFGRTLGVKLGATD
LRGINGGVPGWGGNNTRIALGGNYSSIGDTTLQQATGSIYANSQFVNLPANTSSLGGATA
ATFALSLFGASSNRFLNLELSALEAEGKGKLVSSPRVVTADQVKALIEQGTELPYQTGGN
QQTAPSIAFRKATLKLEVTPQITPEGNIIMDVDVNKDSVGQQTLAGFAINTKHVKTQVLV
ENGGTVVIGGIFETTETESVNKVPVLGDIPFLGVLFRNKTRVANKTELLVFLTPKVITDR
NTALGR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacgcccaggagattgcatccatgaacagatggcgtgcgccgttggtggcgctc
ttcgtcgccacggtcctgccgtcggtggcctgggcgcagaccgtcatccagtcgatcacg
agcagccagcaagctggcagcgagacgatccgcatcgagctcaacgagcccctgatcaac
gcgccgcgcggtttcgtgctgcagacgccggcgcgcatcgcgctcgatctgctgggcgtc
gtcagcggcacggtgcggccttcgcaggaggtcaatctcggcaacctgcgatcgctcgcg
ctggcgcaggccggcgaccgcacgcggctggtgctgaacctgcgccaggccacccagtac
cgcaccgagcagcagggcaaggtgctgctggtgatcctcgagccggtgccggtggccgcc
gcgctggccacggcgccgagcgagccggtgcatttttccgagagccagaacaaccagccc
gagcgcatccgcgacatcgatttccgccgcggccgtgacggcgccggtcgggtggtggtc
gatctgcccagcacccaggtcggcgtggacatcaagcagcagggccagaacctggtgatc
gagttcctgcgctcgaacgtgcctgaatcgctggtgcgccgcctcgacgtcaccgatttc
ggtacgccggtgcattcgatctcgaccacccagaacggcgaccgcgtgcgcatggtggtc
gagccgcgtggcagctgggagcacagcgcctaccagaccgacaaccagttcgtgctggaa
gtgcggccgcagaaggtcgatccgcagaagctgacgcaaggcccgggtttcacgggcgac
aagctgtcgctgaacttccagagcatcgaggtgcgctcgctgctgcaggtgatcgccgac
ttcaccaacttcaacatcgtcaccagcgacagcgtcaccggcaacgtcacgctgcgcctg
aaggacgtgccgtgggaccaggcgctcgacatcatcatgcaggccaagagcctgggcgtg
aagaaggccggcaacgtgctgtggatcgcgcccaaggatgagctggcggccaaggaaaag
caggaactcgaggcgcgcaagcagatcgccgacctcgaaccgctgcgcacgcagtcgttc
cagctcaactacaccaaggccgaggaagtggtgaagagcctgaccggccagcagcaaggc
agcgccggcaccggccagggtggcaacgtcacgcgcatcctgtcgcagcgcggcagcgcc
gcgtacgagtcgcgcaccaaccagctcttcgtctcggacctcccgtccaagctcgaagaa
gtggcgcagatgatcgccaagatcgacgtgccggtgcgccaggtgatgatcgaggcccgc
atcgtcgaggccgaagacagcttcggccgcacgctgggcgtcaagctcggcgcgaccgac
ctgcgcggcatcaacggcggcgtgccgggctggggtggcaacaacacccgcatcgcgctg
ggtggcaactattcgtcgatcggcgacaccacgctgcagcaagccaccggctcgatctac
gccaactcgcagttcgtcaacctgccggccaacaccagttcgctcggcggggccacggcg
gcgacctttgcgctgtcgctgttcggcgcgtcgtccaaccgtttcctgaacctcgaactg
tcggcgctcgaggccgaaggcaagggcaagctggtctcgagcccgcgagtggtcaccgcc
gaccaggtcaaggcgctgatcgagcagggcaccgaactgccctatcagaccggcggcaac
cagcagaccgcaccgtcgatcgccttccgcaaggccacgctgaaactcgaagtcacgccc
cagatcacgcccgagggcaacatcatcatggacgtcgacgtcaacaaggacagcgtcggc
cagcagaccctggcgggtttcgcgatcaacaccaagcatgtcaagacgcaggtgctggtc
gaaaacggcggcacggtcgtgatcggcggcatcttcgagaccaccgagaccgaatcggtc
aacaaggtgccggtgctgggtgacatcccgttcctcggcgtgctgttccgcaacaagacg
cgggtggcgaacaagaccgagttgctggtgttcctgacgccgaaggtgatcacggatcgg
aatacggcgctggggcggtga
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