Leptothrix cholodnii: Lcho_3445
Help
Entry
Lcho_3445 CDS
T00681
Name
(GenBank) tyrosyl-tRNA synthetase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Lcho_3445
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lch01007
]
Lcho_3445
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lch03016
]
Lcho_3445
03029 Mitochondrial biogenesis [BR:
lch03029
]
Lcho_3445
Enzymes [BR:
lch01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
Lcho_3445
Amino acid related enzymes [BR:
lch01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Lcho_3445
Transfer RNA biogenesis [BR:
lch03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Lcho_3445
Prokaryotic type
Lcho_3445
Mitochondrial biogenesis [BR:
lch03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Lcho_3445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
S4_2
SYY_C-terminal
TyrRSs_C
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ACB35703
UniProt:
B1Y347
LinkDB
All DBs
Position
complement(3847943..3849184)
Genome browser
AA seq
413 aa
AA seq
DB search
MSSLPFSNTSPTPPSDAVLAALQVSRRGCEELLPEADWLKKLVRSEASGTPLRIKLGLDP
TAPDIHLGHTVVLNKLRQLQDLGHTVIFLIGDFTSMIGDPSGRNTTRPPLTAEQIKLNAE
TYYRQASLVLDPARTEIRYNSEWCDPLGARGMIALASRYTVARMMERNDFHERFHAGTSI
AVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLMGRHLQAEYGQEPQCILTMPLLVGLD
GVEKMSKSKGNYIGISEAANDMFAKLLSISDTLMWSYFTLLSFRSEEAIAALKAEVDAGR
NPKDAKVLLAKEITARFHGAAAADAAEQDFQNRAKGGIPDDLPQVSLSGAPLGIGALLKQ
ANLVPSSSEAMRLIEQGGVRIDGGVISDKGLKLAAGRYVLQVGKRKFAQVDLS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcctgccgttcagcaacacctcgcccactccgccctccgacgccgtcctggcg
gccctgcaagtgagccggcggggctgcgaggagttgctgcccgaagccgactggctcaag
aagctcgtgcgctcggaggccagcggcacgccgctgcgcatcaagctcggcctcgacccg
accgcgcccgacatccacctcggccacaccgtggtgctcaacaagctgcgccagctgcag
gacctgggccacacggtgatcttcctgatcggcgacttcacgtcgatgatcggcgacccg
tccgggcgcaacaccacccgcccgccgctgacggccgagcagatcaagctcaacgccgaa
acctactaccgccaggccagcctggtgctcgatccggcgcgcaccgagatccgctacaac
agcgagtggtgcgacccgctgggcgcgcgcggcatgatcgcgctggcctcgcgctacacc
gtggcgcgcatgatggagcgcaacgatttccacgagcgcttccatgccggcacctcgatc
gcggtgcacgagttcctgtacccgctgatgcagggttacgactcggtggcgctgaaaagc
gacctcgagctcggcggcaccgaccagaagttcaacctgctgatgggccgccacctgcag
gccgaatacggccaggagccgcagtgcatcctgaccatgccgctgctggtcgggctcgac
ggcgtcgagaagatgtccaagagcaagggcaactacatcggcatcagcgaggcggccaac
gacatgttcgccaagctgctgtcgatcagcgacacgctgatgtggtcgtacttcaccctg
ctgagctttcgcagcgaagaggcgatcgctgcgctcaaggccgaggtcgacgccggccgc
aaccccaaggacgccaaggtgctgctggccaaggagatcaccgcgcgcttccacggcgcg
gcggcggcggacgcggccgagcaggatttccagaatcgcgccaagggcggcattcccgat
gatctgccgcaggtcagcctgtcgggcgcgccgctgggcatcggcgccttgctcaagcag
gccaacctggtgccgtcgtccagcgaggccatgcgcctgatcgagcagggcggcgtgcgc
atcgacggcggcgtgatcagcgacaagggcctcaagctcgccgccggccgctacgtgctg
caggtgggcaagcgcaagttcgcgcaggtcgatctgagttga
DBGET
integrated database retrieval system
