Leptothrix cholodnii: Lcho_3492
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Entry
Lcho_3492 CDS
T00681
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
lch
Leptothrix cholodnii
Pathway
lch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lcho_3492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_3492
Enzymes [BR:
lch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Lcho_3492
DNA repair and recombination proteins [BR:
lch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Lcho_3492
Prokaryotic type
Lcho_3492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_2
HHH_8
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ACB35746
UniProt:
B1Y3P3
LinkDB
All DBs
Position
complement(3903716..3904870)
Genome browser
AA seq
384 aa
AA seq
DB search
MSRAATAELPSIAADLVRWQRQHGRHGLPWQASRDPYRVWLSEVMLQQTQVATVLGYYER
FLQRFPDIAALAAAPLDDVLALWSGLGYYSRARNLHRCAQVVVAEHGAALPRRAEQLVEL
PGIGPSTAAAIASFCHGERVSIFDGNVKRVLARLLAFEGDLAQAGAAKVLWAQADRLVPT
DAADMPAYTQGLMDLGATVCTPRDPQCPACPLQRACRAHAAGSVLTYPIKSRKLKRSRRE
NWCLWLSLGDAVWLQQRPDTGIWAGLWAWPLFDDTDAVERLTAQLLAALGGHAERLQANR
LPGFVHVLTHLDWTLHPCRLHLPAPVVLQAREPGGGDGERGDGPLERLDAVLNQQLGAGR
WHAAADLHRLGLPAPLRKVLLDIT
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgcgccgccacggccgagctgccatccatcgccgccgatctggtgcgctggcag
cgccagcacggccgccacggcctgccctggcaggccagccgcgacccgtatcgcgtctgg
ctgtccgaggtcatgctgcagcagacccaggttgccaccgtgctcggttactacgagcgc
ttcctgcagcgctttcccgacatcgccgcgctcgccgccgcgccgctcgacgacgtgctg
gcgctgtggagcggcctgggctactacagccgcgcgcgcaacctgcaccgttgcgcgcag
gtggtggtggccgaacacggcgctgcgctgccgcgccgtgccgagcagctggtcgagctg
ccgggcatcggcccctcgaccgccgccgccatcgcctcgttctgccacggcgagcgggtc
tcgatcttcgacggcaacgtcaagcgcgtgctcgcgcggctgctggcgttcgagggcgac
ctggcccaggcgggcgcggccaaggtgctgtgggcgcaggccgaccggctggtgccgacc
gacgccgccgacatgccggcctacacccagggcctgatggacctgggcgccacggtctgc
acgccgcgcgatccgcaatgccccgcctgcccgctgcagcgcgcctgccgcgcgcatgcc
gccgggtcggtcctgacctatccgatcaagtcgcgcaagctcaagcgcagccggcgcgag
aactggtgcctgtggctcagcctgggcgacgcggtctggctgcagcagcgtcccgacacc
ggcatctgggcggggctctgggcctggcccttgttcgacgacaccgacgcggtcgagcgc
ctgacggcgcagctgctcgccgccctcggcggccatgccgagcggctgcaggcgaaccgc
ctgcccggcttcgtgcacgtgctcacgcacctcgactggacgctgcacccctgccgcctg
cacctgccggcgccggtggtgctgcaagcccgtgagcccggcgggggtgacggggaacgc
ggtgacggcccgctcgagcgcctcgatgccgtgctgaatcagcagctcggtgccggccgc
tggcacgctgcagccgatctgcaccggctcggactgccggcgccgctgcgcaaggtgctg
ctcgatatcacctga
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