Leptothrix cholodnii: Lcho_3593
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Entry
Lcho_3593 CDS
T00681
Name
(GenBank) putative ABC transporter substrate binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02010
ABC transporters
lch02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lcho_3593
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lcho_3593
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3593
Transporters [BR:
lch02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Lcho_3593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
HAD_PNKP
DUF6890
Motif
Other DBs
NCBI-ProteinID:
ACB35847
UniProt:
B1Y4E6
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All DBs
Position
4010876..4012087
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AA seq
403 aa
AA seq
DB search
MTFKTLTLAAALAAAFAPAQAQISDNLVRIGVLTDLSGVYSDVAGKGTVIATQMAIDDFV
AKEKPAFKIESISADHQNKGDVAANKAREWFEREKIDVVSELVTTSVALAVQKIAKEKNK
VVLVSGAASTRVTNEDCNDVTVHWTYDTYAVANGTAKAVTKAGGKKWFFLTADYAFGHSL
EKDAIDVVKANGGEVMGTVRHPFPGSDFSSFLLKAQSSGAQIIGLANAGGDTINSIKQAA
EFGVTPKQQLAGLLMFISDVHSLGLKTTQSMYLTEGFYWNLNDDTRAWSKRFFEQAKRMP
TMVQAGQYSSVMHYLKAVKAAGTDDTAKVMAQMKKTPVNDFFAKGGTIREDGRMVHDMYL
LQVKKPAESTTPWDYYKVVATIPAAEAFQPLAASKCALVKKPS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaagaccctcacgctggccgccgcgctggccgccgcctttgccccggcccag
gcgcagatctccgacaacctcgtgcgcatcggcgtgctgaccgatctgtcgggcgtctat
tccgatgtggccggcaagggcaccgtgatcgccacgcagatggcgatcgacgacttcgtc
gccaaggagaaaccggccttcaagatcgagtcgatctcggccgaccaccagaacaagggc
gacgtggccgccaacaaggcccgcgaatggttcgagcgcgagaagatcgacgtggtctcc
gagctggtgaccacctcggtggcgctggcggtgcagaagatcgccaaggagaagaacaag
gtggtactggtttcgggcgcagcctcgacccgtgtcaccaacgaagactgcaacgacgtc
acggtgcactggacctacgacacctacgcggtcgccaacggcaccgccaaggccgtcacc
aaggccggcggcaagaagtggttcttcctgaccgccgactacgcattcggccactcgctg
gagaaggacgccatcgatgtcgtcaaggccaacggcggcgaggtgatgggcacggtgcgt
cacccgttcccgggttcggacttctcttccttcctgctcaaggcgcagtcgtcgggcgcg
cagatcatcggcctggccaatgcaggcggcgacaccatcaactcgatcaagcaggccgcc
gaattcggcgtcacgcccaagcagcagctcgccggcctgttgatgttcatcagcgacgtg
cattcgctgggcctgaagaccacgcagtcgatgtacctcaccgaaggtttctactggaac
ctcaacgacgacacccgggcctggtccaagcgcttcttcgagcaggccaagcgcatgccg
acgatggtgcaggccggccagtattcatcggtgatgcactacctgaaggcggtcaaggcg
gccggtaccgacgacaccgcaaaggtgatggcgcagatgaagaagacccccgtcaacgac
ttcttcgccaagggcggcacgatccgcgaagacggccgcatggtgcacgacatgtacctg
ctgcaggtcaagaagccggccgagtcgaccacgccctgggactactacaaggtggtggcc
acgatccccgcggccgaggccttccagccgctcgcggcttcgaagtgcgcgctggtcaag
aagccttcctga
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