Leptothrix cholodnii: Lcho_3611
Help
Entry
Lcho_3611 CDS
T00681
Name
(GenBank) TRAP C4-dicarboxylate transport system permease DctM subunit
KO
K21393
TRAP-type transport system permease protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lcho_3611
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3611
Transporters [BR:
lch02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Lcho_3611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
Motif
Other DBs
NCBI-ProteinID:
ACB35865
UniProt:
B1Y4W9
LinkDB
All DBs
Position
complement(4033139..4035025)
Genome browser
AA seq
628 aa
AA seq
DB search
MNTAAPASAPAVAAPLRSRLRALGRFDEVLASAALVLMTLIPLVEILLRPLLGRGVENAP
VLVQHLGLVLAMFGAVAAERHGHLTTLGSGLARLGGARVQAAVRLFAHGGAALICGLLAL
ASWRFVASEIEVAHELAYGLRLWWVEAAMPVGFVLLGLKLGSRCFSSRLRWVSAVALPAI
GYALAWQFDGESLMLWPALLVLLALLLAGAPIFAVLGGLALALFWQDALPLASIPLSHYQ
ITVNPSLPALPLFTLAGLIFARTGAAQRLGAVFTALFGGGVTGTVVAAAVLCSFFTALTG
GSGVTILALGGLLLPLLRNAGFPERRGIGLVTSASALGVLLAPSVPLIMYAIIARVPINT
MFVAGLLPAAVMVAFLLVFGGYLRRGARTDSAQAADVTVTRAPDLAAPRVRAAAWAAKWE
ILAPVVAIGSLASGLATPTESAALTAAYAVLTQAVAHRELGARLLAQCLSHCAQVIGGVM
LILGMALGLTNFLVDAGIPDAAIEWVQGVIPNRFVFLLALTAFLFVAGALMEIYAALVVL
VPLLLPVALSYGIDPVHFGIIFLAGMEMGFLCPPAGMNIYFASAMFGKPIHYVAASVLPA
LLAIFLGTLAIAWLPLLATGLPALLGLR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggctgcccctgcatcggcacccgccgtggccgcgccgttgcgcagccgcctg
cgggcgctcggccgtttcgacgaggtgctggcgtccgccgcgctggtgttgatgacgctg
atcccgctggtcgagatcctgttgcgcccgctgctcggccgcggcgtcgagaacgcaccg
gtgctggttcagcacctcggcctggtgctggcgatgttcggcgccgtggcggccgagcgc
cacggccatctgacgacgctgggcagcggcctggcccggctcggtggcgcgcgtgtgcag
gccgccgtgcggctgtttgcccacggcggcgcggcgctgatctgcggcctgctggcgctg
gcgagctggcgcttcgtggccagcgagatcgaggtcgcgcacgagctggcctacggcctg
cgcctgtggtgggtcgaggcggcgatgccggtcggcttcgtgctgctgggcctcaagctc
ggcagccgctgtttttccagccggctgcggtgggtcagcgcggtcgccctgccggcgatc
ggctacgcgctggcctggcagttcgatggcgagagcctgatgctgtggccggcgctgctc
gtgctgctggcgctgctgctggccggcgcgccgatcttcgcggtgctgggcggcctggcg
ctggcgctgttctggcaggacgcgctgccgctggcgtcgatcccgctgtcgcactaccag
atcaccgtcaacccgtcgctgccggcgttgccgctgttcacgctggccgggctgatcttc
gcgcgcaccggcgcggcgcagcggctgggcgcggtgttcacggcgctgttcggcggcggc
gtcaccggcacggtggtggccgcggcggtgctgtgttcgttcttcaccgcgttgaccggc
ggcagcggcgtgaccatccttgcgctcggcggcctgctgctgccgctgctgcgcaacgcc
ggtttccccgagcggcgcggcatcggcctcgtcaccagcgccagcgcgctgggcgtgctg
ctggcgccgtcggtgccgctgatcatgtacgccatcatcgcgcgggtgccgatcaacacg
atgttcgtcgccggcctgctgccggccgcggtgatggtggccttcctgctggtgtttggc
ggctacctgcggcgtggcgctcgcaccgattccgcccaagccgccgacgtcaccgtcacc
cgagcgccggacctggctgcgccgcgcgtgcgggccgcggcctgggcggccaaatgggag
atcctggcgccggtggtggcgatcggctcgctcgccagcggcctggccacgcccaccgaa
agcgccgcgctgaccgccgcctacgcggtgctgacgcaggccgtggcgcaccgcgagctg
ggtgcgcgcctgttggctcagtgcctgagccactgcgcgcaggtgatcggcggcgtgatg
ctgatcctgggcatggcgctggggctgaccaacttcctggtcgacgccggcatccccgat
gcggcgatcgagtgggtgcagggcgtcatccccaaccgcttcgtgttcctgctcgcgctg
accgccttcctgttcgtggccggcgcgctgatggagatctacgccgcgctggtggtgctg
gtgccgctgctgctgccggtggcgctgagctacggcatcgacccggtgcacttcggcatc
atcttcctggccggcatggagatgggtttcctgtgtccgccggcgggcatgaacatctac
ttcgcctcggccatgttcggcaagccgatccactacgtggcggcctcggtgctgccggcg
ctgctggcgatctttctgggcacgctggcgatcgcgtggctgccgctgctcgccaccggc
ctgccggcgctgctgggcctgcgctga
DBGET
integrated database retrieval system
