Leptothrix cholodnii: Lcho_3810
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Entry
Lcho_3810 CDS
T00681
Name
(GenBank) transcriptional regulator, LysR family
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lch03000
]
Lcho_3810
Transcription factors [BR:
lch03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Lcho_3810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
PBP_like_2
HTH_20
HTH_24
PBP_like
HTH_30
MarR
Motif
Other DBs
NCBI-ProteinID:
ACB36064
UniProt:
B1Y6N6
LinkDB
All DBs
Position
complement(4276165..4277103)
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AA seq
312 aa
AA seq
DB search
MNFQQLRAVRETARSGFNLTDVAAALHTSQPGVSRQIRELEDELGVEIFVRAGKRLTGLT
PPGEAVLPIVERLLLDADNLRRAGADFASQDTGRLSIAATHSQARYALPQVVRDFRTLYP
HVTLNLHQGSPRQVAEMLLSGEADIGVATEALAQYEQLVALPCYRWTHSVVVPVGHPLLD
VDGPITLAQLAREPIVTYDTGYTGRTHIDEAFARAGLKPAVVLTAMDADVIKTYVELGIG
VGLVASIAFDAERDRNLQALDAGHLFEINLTRLAIRRGTWLRGYVYAFIEAFAPTLTREA
VEQALTGEPVED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgaacttccagcaactgcgcgccgtgcgcgaaacggcccgctcgggcttcaacctgacc
gacgtggccgccgcgctgcacacctcgcagcccggcgtcagccgccagatccgcgagctc
gaggacgagctcggcgtcgagatcttcgtgcgcgccggcaagcgcctgaccggcctgaca
ccgcccggcgaggcggtgctgccgatcgtcgagcgcctgctgctcgacgccgacaacctg
cggcgcgccggtgccgacttcgcgtcccaggacaccggccggctgtcgatcgccgccacc
cactcgcaggcgcgttacgcgctgccgcaggtggtgcgcgatttccgcacgctctatccg
cacgtcacgctcaacctgcaccagggctcgccgcgccaggtggccgagatgctgctgtcg
ggcgaggccgacatcggcgtcgccaccgaggcgctggcgcagtacgagcagctggtggcg
ctgccgtgttaccgctggacccacagcgtcgtggtgccggtcgggcatccgctgctcgat
gtggacgggccgatcacgctggcgcagctcgcgcgcgaacccatcgtcacctacgacacc
ggctacaccggccgcacccacatcgacgaggccttcgcccgcgccggcctcaagcccgcc
gtggtgctgaccgcaatggacgccgacgtcatcaagacctacgtcgagctcggcatcggc
gtgggcctcgtcgcctcgatcgccttcgacgccgagcgcgaccgcaacctgcaagcgctc
gacgccggccacctgttcgagatcaacctgacccggctggcgatccggcgcggcacctgg
ctgcgcggctacgtctacgccttcatcgaggcctttgcaccgacgctgacacgcgaggcg
gtcgagcaggcgctgacgggcgagccggtcgaagactga
DBGET
integrated database retrieval system
