Leptothrix cholodnii: Lcho_3850
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Entry
Lcho_3850 CDS
T00681
Name
(GenBank) two component transcriptional regulator, LuxR family
KO
K20264
two-component system, NarL family, response regulator FusR
Organism
lch
Leptothrix cholodnii
Pathway
lch02020
Two-component system
lch02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lcho_3850
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lcho_3850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lch02022
]
Lcho_3850
Two-component system [BR:
lch02022
]
NarL family
FusK-FusR (virulence regulation)
Lcho_3850
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
HTH_29
HTH_23
HTH_28
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ACB36104
UniProt:
B1Y7F6
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All DBs
Position
4317906..4318580
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AA seq
224 aa
AA seq
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MSVTDSSVPTPPPATPWRIALADDHAIVRVGYRRLLELEPDLSVVAEYADADSAAADLCQ
ARRTAVDLLILDLSMPGRSGLDLLRQLQRDRPALKVLMVSMHDSAALVGQCLGAGACGFV
AKSSDPQALIGAVRQALRGEVVDTHGPSAPPRAGRRPLPHEQLTGRELEVLQLLLAGLGV
EVAAARIGLSEKTVSNYQTQIRQKLGVANSIELVHYARQHGLMP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaccgactcgtccgtaccgactccgccgcccgccacgccgtggcgcatcgcc
ctggccgacgaccacgcgatcgtgcgcgtcggctaccgccgcctgctcgaactggaaccc
gacctgagcgtggtggccgaatacgccgacgccgacagcgccgcggccgatctctgccag
gcgcgccgcacggcggtcgacctgctgatcctcgacctctcgatgcccgggcgcagcggc
ctggacctgctgcgacaactgcagcgcgaccggccggcgctgaaggtgctgatggtgtcg
atgcacgacagcgcggcgctggtcggccagtgcctgggcgcgggcgcctgcggcttcgtc
gccaagagcagcgacccgcaggcgctgatcggcgcggtgcgccaggctttgcgcggcgag
gtggtcgacacgcacgggccgtccgccccaccccgcgccggccgccggccgctgccgcac
gaacagctcaccggccgcgagctcgaggtgctgcagctgctgctggccggcctgggtgtc
gaggtggcggccgcgcgcatcggcctgagcgaaaagacggtgtccaactaccagacccag
atccgccagaagctcggcgtcgccaactcgatcgagctggtgcattacgcgcgccagcac
ggcctgatgccctga
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