Leptothrix cholodnii: Lcho_4026
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Entry
Lcho_4026 CDS
T00681
Name
(GenBank) ABC transporter-related protein
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
lch
Leptothrix cholodnii
Pathway
lch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lcho_4026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_4026
Transporters [BR:
lch02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Lcho_4026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_25
AAA_21
AAA_22
VIT1
AAA_33
nSTAND1
DUF87
AAA_28
Zeta_toxin
AAA_18
NACHT
DEAD
MMR_HSR1
RsgA_GTPase
APS_kinase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACB36280
UniProt:
B1XWT1
LinkDB
All DBs
Position
complement(4508571..4510430)
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AA seq
619 aa
AA seq
DB search
MRRAHSVEPAPQSPPGTPRSDWFTIRRLAPYLWRYRWRVGFALTFLVAAKLANVGVPVLL
KQLVDGLAIPAGDPRALLVVPVGLLVAYAGLRLMTTVFTELRELVFAKATHGAARQIALE
TFRHLHALSLRFHLERQTGGMTRDIERGTRALQSLVSYSLFTIVPTLVELVLVLVLLGSQ
FDMGFVWITLAALVAYAVFTITVTEWRTQYRRHMNELDSKAHSRAIDALLNYETVKYFNN
EDFEARRYDEGLDAFRRAQLKSQGTLSLLNTGQQFIIAASLVAMLWRATDGVVEQRLTLG
DFVMVNALLIQLYIPLNFLGVLYREVKQSLTDLDKMFNLLEREREVADAPDAHVLQVADA
TVRFEHVDFSYDPRRQILHDVSFEIPAGRTVAVVGASGSGKSTLARLLYRFYDVGGGGIS
VDGQDLRTLTQDSLRRAIGIVPQDTVLFNDSIGYNIGYGRAGASQAEIEAAARAAHIHDF
IVAQPQGYDTVVGERGLKLSGGEKQRVAIARTLLKNPPILIFDEATSALDSANERAIQAE
LSSAARGKTALVIAHRLSTVVDAHQIVVLDHGRVIERGTHLQLLALQGAYARMWRLQQSS
QSRAASQDGAEGEPVAAAL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcgcccactccgtcgaacccgccccccagtcgccgcccggcaccccgcgcagc
gactggttcaccatccggcgcctggcgccctacctgtggcgctaccgctggcgggtcggt
tttgcgctgactttcctggtcgccgccaagctggccaacgtcggcgtgccggtgctgctc
aagcagctggtcgacgggctggcgattcccgccggcgatccgcgcgcgctgctggtcgtg
ccggtcggcctgctggtggcctacgccggcctgcggctgatgacgacggtgttcaccgaa
ctgcgcgagctggtgttcgccaaggccacgcacggcgcggcacggcagatcgcgctggag
accttccgccacctgcacgccctgagcctgcgtttccacctcgagcgccagaccggcggc
atgacacgcgacatcgagcgtggcacgcgcgcgctgcagtcgctggtgagctattcgctg
ttcacgatcgtgcccacgctggtcgagctggtgctggtgctggtgttgctgggcagccag
ttcgacatgggtttcgtctggatcacgctggccgcgctggtggcctacgcggtcttcacg
atcaccgtcaccgagtggcgcacgcagtaccgccggcacatgaacgagctcgattcgaag
gcgcacagccgggcgatcgacgcgctgctgaactacgagacggtcaagtacttcaacaac
gaggacttcgaggcccggcgctacgacgaggggctcgacgccttccggcgcgcgcagctc
aagtcgcagggcacgctgtcgctgctcaacaccggccagcagttcatcatcgccgccagc
ctggtggcgatgctctggcgcgccaccgacggcgtggtcgagcagcgcctgacgctgggc
gacttcgtgatggtcaacgcgctgctgatccagctctacatcccgctgaacttcctgggc
gtgctgtaccgcgaggtcaagcagagcctgaccgacctcgacaagatgttcaacctgctc
gagcgcgaacgcgaggtcgccgacgcgcccgatgcccatgtgctgcaggtggccgacgcc
acggtgcgcttcgagcacgtcgacttcagctacgacccgcgccggcagatcctgcatgac
gtcagcttcgagatcccggccggcaggacggtggcggtggtgggcgcgtcgggttcgggc
aagagcacgctggcgcggctgctgtaccgtttctacgacgtgggcggcgggggcatctcg
gtcgacggccaggacctgcggacgctgacgcaggacagcctgcgccgcgccatcggcatc
gtgccgcaggacaccgtgctgttcaacgacagcatcggctacaacatcggctacggccgc
gccggcgccagccaggccgagatcgaggcggcggcgcgcgcggcgcacatccacgacttc
atcgtggcgcagccgcagggttacgacacggtggtcggcgagcgcggtctgaagctctcg
ggtggcgagaaacagcgcgtggcgatcgcccgcacgctgctgaagaacccgccgatcctg
atcttcgacgaggccacctcggcgctcgattcggccaacgaacgcgccatccaggccgag
ctgtcgagcgcggcgcgtggcaagaccgcgctggtgatcgcgcaccggctcagcacggtg
gtcgatgcgcaccagatcgtcgtgctcgatcacggccgggtgatcgagcgtggcacccac
ctgcaactgctggcgctgcagggtgcctacgcgcgcatgtggcggctgcagcagagcagc
cagtccagggcggcgtcgcaggacggggccgagggagagcccgtagcagcggcgctctga
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