Leptothrix cholodnii: Lcho_4038
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Entry
Lcho_4038 CDS
T00681
Name
(GenBank) ABC transporter-related protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_4038
Transporters [BR:
lch02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Lcho_4038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
HUTI_composite_bact
AAA_29
AAA
AAA_22
Zeta_toxin
DZR_2
MMR_HSR1
AAA_33
zf-C3HC4_3
NB-ARC
DZR
PufQ
Motif
Other DBs
NCBI-ProteinID:
ACB36292
UniProt:
B1XWU3
LinkDB
All DBs
Position
complement(4521255..4523435)
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AA seq
726 aa
AA seq
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MHFGTGQLVLGSRSLHAREAGDAGWRSFTLRPGLALRLSDHAGVGQLELHDDAALLAVWR
YTLGLQVQAVRLVEQFERQIASLDHRHTPAPAEDTATCPICSSPMPEDSEECPVCARELQ
TPPSTWVLLRLGRFAKPYRWQLIIGFMLTLASTAATLVPPYLTIPLMDNVLIPFQNGQRI
DPGYVMLLLSGLLGSALLAWSLGWARTWLLALVSERIAADLRTSAFEHLLTLSLDYFGAK
RTGDLMARIGSETDRISVFLSLHALDFITDVLMLAMTATILFSVNPWLALVTLLPLPFIG
WMIHVVRDRLRHGFEKIDRVWGDVTNVLADTIPGIRVVKAFAQEGREARRFRDANQQNLA
VNDKLNKTWSLFSPTVSLLTDIGLLVVWAFGIWQVSRGEITVGVLTAFIAYIGRFYGRLD
SMSRIVSVTQKAASGAKRIFDILDHVSNVPEPTQPVPIGALQGRVTMESVGFRYGNRAVI
RGLDLEIRPGEMIGLVGHSGSGKSTLVNLICRFYDVSDGAIRVDGVDIRRFAVADYRRHI
GLVLQEPFLFFGTIAENIAYGRPDASRAEIVAAARAAHAHEFILRLPLGYDSLVGERGQG
LSGGERQRISIARALLIDPRVLILDEATSSVDTETEKEIQKALDNLVQGRTTIAIAHRLS
TLRKADRLVVMERGRVVEVGPHDELMARQGAYWRLYEAQARRVDDDGDDRETVPAPTHAA
HPAGQD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcggtaccgggcagctggtgctgggcagccgctcgctgcacgcccgcgaggcg
ggcgatgccggctggcgcagcttcacgctgcgtccgggactggcgctgcggctgagcgat
cacgccggcgtcggccagctcgagctgcacgacgacgcggcgttgctggcggtctggcgc
tacacgctcggcctgcaggtgcaggcggtgcggctggtcgagcagttcgagcggcagatc
gcgtcgctcgatcaccggcacacgccggcgccggccgaagacacggcgacctgcccgatc
tgctcgtcgccgatgcccgaggacagcgaggagtgcccggtctgcgcccgcgagctgcag
acgccgccgtcgacctgggtgctgctgcgcctgggccgcttcgccaagccctaccgctgg
cagctgatcatcggtttcatgctgacgctggcgtcgaccgccgccacgctggtgccgccc
tacctgaccatcccgctgatggacaacgtgctgatcccgttccagaacggccagcgcatc
gaccccggctacgtgatgctgctgctgtcgggcctgctgggctcggcgctgctggcctgg
agcctgggctgggcgcgcacctggctgctggcgctggtgtccgagcgcatcgccgccgac
ctgcgcaccagcgccttcgagcacctgctgacgctgtcgctcgactacttcggcgccaag
cgcaccggcgacctgatggcgcgcatcggctccgagaccgaccgcatctcggtcttcctg
tcgctgcacgcgctcgacttcatcaccgacgtgctgatgctggcgatgaccgcgaccatc
ctgttctcggtcaacccctggctggcgctggtcacgctgctgccgctgcccttcatcggc
tggatgatccacgtcgtgcgcgaccgcctgcgccacggcttcgagaagatcgaccgggtc
tggggcgacgtcaccaacgtgctggccgacaccatccccggcatccgcgtcgtcaaggcg
tttgcccaggaaggccgcgaggcccggcgctttcgcgacgccaaccagcagaacctggcc
gtcaacgacaagctgaacaagacctggagcctgttcagcccgaccgtgtcgctgctgacc
gacatcggcctgctggtggtctgggccttcggcatctggcaggtcagccgcggcgagatc
acggtcggcgtgctgaccgccttcatcgcctacatcggccgcttctacggccggctcgac
tcgatgagccgcatcgtctcggtgacgcagaaggcggcctcgggcgccaagcgcatcttc
gacatcctcgaccacgtctcgaacgtgcccgagcccacccagccggtgccgatcggcgcg
ctgcagggccgcgtgacgatggaatcggtcggcttccgctacggcaaccgggcggtgatc
cgtggcctcgacctcgagatccggcccggcgagatgatcggcctggtcggccacagcggc
tcgggcaagagcacgctggtgaacctgatctgccgcttctacgacgtcagcgacggcgcc
atccgcgtcgatggcgtcgacatccgccgcttcgcggtggccgactaccgccgtcacatc
ggcctggtgctgcaggagccgttcctgttcttcggcaccatcgccgagaacatcgcctac
ggccgccctgacgcgagccgggccgagatcgtcgccgcggcgcgcgccgcgcacgcgcac
gagttcatcctgcggctgccgctgggctacgactcgctggtcggcgaacgcggccagggc
ctgtcggggggcgagcgccagcgcatctcgatcgcgcgcgcgctgctgatcgacccgcgc
gtgctgatcctcgacgaggccacctcgtcggtcgacaccgagaccgaaaaagagatccag
aaggcgctcgacaacctggtgcagggccgcaccaccatcgccatcgcgcaccggctgtcg
accctgcgcaaggccgaccggctggtcgtgatggagcgcggccgggtggtcgaggtcggg
ccgcacgacgaactgatggcccgccagggtgcgtactggcggctctacgaagcacaggcg
cggcgggtcgacgacgatggtgacgaccgcgagaccgtgcccgcacccacccatgcggcc
cacccggccggccaggactga
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