Leptothrix cholodnii: Lcho_4057 Help Entry Lcho_4057         CDS       T00681                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism lch  Leptothrix cholodnii Pathway lch03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:lch00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     Lcho_4057  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:lch02044]     Lcho_4057 Secretion system [BR:lch02044]  Type VI secretion system   Imp/Vas secretion system core components    Lcho_4057 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related IcmF-related_N IcmF_C DUF4131 AAA_22 TrwB_AAD_bind FtsK_SpoIIIE Fig1 Motif Other DBs NCBI-ProteinID:  ACB36309 UniProt:  B1XWW0 LinkDB All DBs Position 4543591..4547253 Genome browser AA seq 1220 aa AA seqDB search MKTLLGWIFNRWTLAVVALLALSLLIWIVGPLIAVAEVRPLDSTRSRLMLIGCLVLALLL MAAWSAWQARRANRSVVEQLMKPAAGGAPAGSESPDVAAMRQRFERALQVLREARFPSAS TAAGGAPVGAIDARGKPAAPKPGLLARLGLQNLGGRYLYQLPWYLIIGAPGSGKTTALRN AGLQFPLAELTGEHRVRGVGGTRDCDWWFTDRAVLIDTAGRFTTQDSDAGRDQGAWSGFL GLLRQSRPRQPINGVLVTVSVPDLLGRSAAERDDYAARVRLRLQELHKQLGVRFPVYLLV TKVDLLNGFGDYFATLDKDSRATPWGTTFTLAQSRSGDHTALAPELKALTQRLQDGLVER LQAETDPQRRARIYGFPLQFGSLHEPLDAFVRDAFAPSPFEPPSLLRGVYFVSGTQEGTP IDRLMGSIARSWQLERAILPPQGASARSYFLERLLGEVVFAEAGLAGTDPRGERRRRLML VGAYAALGLLTAGALAAWATSAVNNRNYVDAVLARVDEVRRLVQATPNRASPDLQPLLPA LAATRQLAQAGWGDAAVPWSLGFGLFQGDKLDAASRSAYQRMLVDAVLPRLALRIEEQLR QRADAPELQYESLKAYLMLHDPQRFDADALAALVRADWAQNLPREVGTAEREQLDQHLDA LLALGPAVSPLPQDQALVTQTRALLAAVPLPQRIYNRLRHQGLGEQVAEFTAARAGGPAA ALVFARASGAPLTRGVPGLYTRDGYQQGFQRKVDAVTRELADEETWVLGNAANGGGGAAG QATRPSAATLADDVRRLYLTDYANTWEAFIADVRLRPTQSLAELVQVTRVLSGPDNPLAT LLKAVVRETTLLGGEEPGAVKAAADRARGAVAAVREGIRALGGDAAAAALPARGVPLESI VDDRFAMLRRYVQAAPGARAPIDDTLVLLNEVQLHLASVELAVRSANPPPPSDLPVRLGA EGARSAEPVRSLLGTLGRSSAGFTGLMQREVLSREVRSMVGDFCTQAVAGRYPLRSGSAT DVTLADFGQLFGPGGRFDRLFQEKLAAHVDTSARPTWRFRANGLGEDAGTLAQFQRAQVI RDTFFPAGGNTPQLRLEFKPVEMDASISQFVLDIDGQVVRYAHGPQIPTSVQWPGPRGTN QVRLQLSPAGASGNGLLNEGPWALLHLFDRVQLEPGRSAERFRATFELDGRKAVFEITAS SVRNPLRLRELAEFSCPNGL NT seq 3663 nt NT seq  +upstreamnt  +downstreamnt atgaagacgctgctgggctggatcttcaaccgctggacgctcgccgtcgtcgcgctgctg gcgctgtcgctgctgatctggatcgtcggcccgctgatcgcggtggccgaggtgcgcccg ctcgacagcacgcgctcgcggctgatgctgatcggctgcctcgtgctggcgctgctgctg atggcggcgtggagcgcctggcaggcccgccgcgccaaccggtcggtggtcgagcagctg atgaagcccgccgccggcggtgcgccggccggcagcgagtcacccgacgtggccgcgatg cgccagcgcttcgagcgcgcgctgcaggtgctgcgcgaggcgcggttcccgtcggcgtcg accgcggccggcggcgccccggtcggtgcgatcgacgcgcgtggcaaacccgccgcgccc aagcccggcctgctggcgcgcctggggctgcagaacctgggcgggcgctacctctaccag ctgccctggtacctgatcatcggcgcgcccggctcgggcaagaccaccgcgctgcgcaac gccggtctgcagttcccgctggccgagctgaccggcgaacaccgcgtgcgcggcgtcggc ggcacgcgcgactgcgactggtggttcaccgaccgcgcggtgctgatcgacaccgccggc cgcttcaccacgcaggacagcgacgccgggcgcgaccagggcgcgtggagcggcttcctc ggcctgctgcgccagtcgcggccgcgccagccgatcaacggcgtgctcgtcaccgtgtcg gtgcccgacctgctcggccgcagcgccgccgagcgcgacgactacgccgctcgcgtgcgc ctgcgcctgcaggagctgcacaagcagctgggcgtgcgtttcccggtctacctgctggtc accaaggtcgacctgctcaacggcttcggcgactatttcgccaccctcgacaaggacagc cgcgccacgccctggggcaccaccttcacgctggcgcagtcacgcagcggcgaccacacg gccctggcccccgagctgaaggcgctgacccagcgcctgcaggacggcctggtcgagcgc ctgcaggccgagaccgacccgcagcggcgcgcccgcatctacggctttccgctgcagttc ggcagcctgcacgagccgctcgacgccttcgtgcgcgacgccttcgcgccctcgccgttc gagccgccgagcctgctgcgcggcgtgtactttgtcagcggcacgcaggaaggcacgccg atcgaccgcctgatgggctcgatcgcgcgcagctggcagctcgaacgcgcgatcctgccg ccgcagggcgccagcgcgcgcagctacttcctggagcgcctgctcggcgaggtggtgttc gccgaggccggcctggccggcaccgatccgcgcggcgaacggcgccgtcgcctgatgctg gtgggcgcctacgccgcgctcggcctgctgacggcgggcgcgctggcggcctgggcgacc agcgcggtcaacaaccgcaactacgtcgacgccgtgctggcgcgggtcgacgaggtgcgc cggctggtgcaggccacgcccaaccgtgccagccccgacctgcagccgctgctgccggcg ctggccgccacccgccagctggcgcaggccggctggggcgacgcggcggtgccgtggtcg ctcggcttcgggctgttccagggcgacaagctcgacgccgcctcgcgcagcgcctatcag cgcatgctggtcgacgccgtgctgccgcgcctggcgctgcgcatcgaggagcagctgcgc cagcgcgccgacgcgcccgagctgcagtacgaatcgctcaaggcctacctgatgctgcac gacccgcagcgcttcgacgccgacgcgctggccgcgctggtgcgcgccgactgggcgcag aacctgccgcgcgaggtcggcacggccgagcgcgagcagctcgaccagcacctcgacgcc ctgctcgcgctcggccccgccgtctcgccgctgccgcaggaccaggcgctggtgacgcag acccgcgccctgctcgccgccgtgccgctgccccagcgcatctacaaccgcctgcgtcac cagggcctgggcgagcaggtggccgagttcaccgccgcccgcgccggcgggccggccgcg gcgctggtgttcgcgcgcgccagcggcgccccgctgacgcgcggcgtgcccgggctctat acgcgtgacggctaccagcagggcttccagcgcaaggtcgacgccgtcacccgcgaactg gcggatgaagaaacctgggttcttgggaacgccgccaatggcggcggcggcgctgcgggc caggccacccgcccgagcgccgccacgctggccgacgacgtgcgccgcctgtacctgacc gactacgccaacacctgggaggccttcatcgccgacgtgcgcctgcgcccgacccagagc ctggccgagctggtgcaggtcacgcgcgtgctgtccggccccgacaacccgctggccacg ctgctgaaggcggtggtgcgcgagaccacgctgctcggcggcgaggagcccggcgccgtc aaggccgccgccgaccgcgcgcgtggtgcggtggccgcggtgcgcgagggcatccgcgcg ctcggcggcgatgcggccgccgccgcgctgcccgcgcgcggtgtgccgctcgaatcgatc gtcgacgaccgcttcgcgatgctgcgccgctacgtgcaggccgcgccgggtgcgcgcgca ccgatcgacgacaccctcgtgctgctcaacgaggtgcagctgcacctggccagcgtcgag ctggcggtgcgcagcgccaacccgccgccgccgtcggacctgccggtgcgcctgggcgcc gagggcgcacgctcggccgagccggtgcgcagcctgctcggcacgctgggccgcagcagc gccggcttcaccgggctgatgcagcgcgaggtgctgtcgcgcgaggtgcgctcgatggtg ggcgacttctgcacgcaggccgtggccgggcgctacccgctcaggagcggctcggccacc gacgtcacgctggcggatttcggccagctgttcggaccgggcgggcgcttcgaccggctg ttccaggagaagctggccgcccacgtcgacacctcggcgcggccgacctggcgcttccgc gccaacgggctgggcgaggacgccggcacgctggcgcagttccagcgcgcgcaggtcatc cgcgacaccttcttcccggccggcggcaacacgccgcagctgcggctggagttcaagccg gtcgagatggacgccagcatcagccagttcgtgctcgacatcgacggccaggtggtgcgc tacgcccacggcccgcagatcccgaccagcgtgcaatggcccggcccgcgcggcaccaac caggtgcggctgcagctcagccccgccggcgccagcggcaacggcctgctcaacgaaggc ccgtgggcgctgctgcacctgttcgaccgcgtgcagctcgaacccggccgcagcgccgag cgctttcgcgccaccttcgagctcgacggccgcaaggcggtgttcgagatcaccgccagc agcgtgcgcaacccgctgcgcctgcgcgagctggccgagttcagctgcccgaacggcctg tga

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