KEGG   Leptothrix cholodnii: Lcho_4080
Entry
Lcho_4080         CDS       T00681                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
lch  Leptothrix cholodnii
Pathway
lch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lch00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Lcho_4080
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lch02044]
    Lcho_4080
Secretion system [BR:lch02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Lcho_4080
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484 DUF2345 Sarcoglycan_1
Other DBs
NCBI-ProteinID: ACB36332
UniProt: B1XWY3
LinkDB
Position
complement(4571976..4574291)
AA seq 771 aa
MANPITVSSPLPAQDLFFESMRYRGGLSTLGELELDLLSPKPGLDPLALLGQPLSVNVTL
HDGSQRHFSGLVSRFGMGRDRPAGAAPTGAAAGQGRYYAYRARVVPWLWFLTRTADCRIF
QEQTVPDIVKQVFADHDIASFEFKLFRSYRKLGYCVQYRESDFHFVARLLEHEGIYWYVE
HGDGAHKLVLVDAMGAHDAAPGCPSLRYTEDLAQAPPDQEFVTRWRFAEGVKSGKVALTS
YDFERPSTPLAVDAVRERDYPHADYEVFDFQGDYIQAADGSHYADNAADAFQTRFVRHHA
SANALGVEVGRRLKISKHPRDSINAEYLITDLDVHAQVAEHGAAQAVSRFDCEFDAIPAE
QQFRPMRRARKPSVQGPQTAVVVGPAGEEIFTDKYGRVKVQFHWDRYGQRDEKSSCWVRV
SQPWAGKNFGFMQIPRIGQEVVVDFLEGDPDQPLITGRIYNAEQMPPWDLPANATQSGVL
SRSSQGGAYGNANALRFEDKKGAEQLWLHAEKNQDIEVENDETHWVGHDRSKTVDHDEQV
HVKHDRTEVVDHDEQITVHHDRRERVDNDESIGIGRDRKMLIERDKTETVARDKGIHIGG
SHSESVGGSMSVSVAGTLTESVGVNYAETVGGAMEITVGAVMAITVGGALAETVGGSKSA
SVGSGKSETIGGSLSVTVAKDVTESISGNRTVTVHKNLTQAVKGDQVVEVTKNASVKAKK
IQLVADDEISLKTGSAEITMKKNGDITIKGNKITVKGDSDVILKGSKIAEN
NT seq 2316 nt   +upstreamnt  +downstreamnt
atggccaaccccatcaccgtcagcagccccttgccggcgcaggacttgttcttcgagtcc
atgcgctaccgcggcggcctgagcacgctcggtgagctggagctggatctgctgagcccc
aagcccgggctcgatccgctggcgctgctgggccagccgctgagtgtcaacgtcacgttg
catgacggcagccagcgccacttcagcggcctggtcagccgcttcggcatgggccgcgac
cggcccgccggcgcggcgccgacgggtgccgcggccggccagggccgctactacgcctac
cgcgcgcgggtggtgccgtggctgtggttcctgacccgcaccgccgactgccggatcttc
caggagcagacggtgcccgacatcgtcaagcaggtgttcgccgaccacgacatcgcgagc
ttcgagttcaagctgttccgcagctatcgcaagctcggctactgcgtgcagtaccgcgag
agcgatttccacttcgtcgcccgcctgctcgaacacgaaggcatctactggtacgtggaa
cacggcgacggcgcgcacaagctggtgctggtcgacgccatgggcgcgcacgatgccgcg
ccgggctgcccctcgctgcgctacaccgaggatctggcgcaggcgccgccggaccaggag
ttcgtcacccgctggcgttttgccgagggcgtcaagagcggcaaggtggcgctcaccagc
tacgacttcgagcgcccgtccacgccgctggcggtcgacgcggtgcgcgagcgcgactac
ccgcacgccgactacgaggtcttcgatttccagggcgactacatccaggccgccgacggc
agccactacgccgacaacgccgccgacgccttccagacccgcttcgtgcgccaccacgcc
agcgccaacgcgctgggtgtggaggtgggccggcggctgaagatcagcaagcacccgcgc
gactcgatcaacgccgaatacctgatcaccgacctcgacgtgcacgcgcaggtggccgaa
cacggcgcggcgcaggcggtgagccgcttcgattgcgagttcgacgcgatcccggccgag
cagcagttccgccccatgcggcgcgcccgcaagcccagcgtgcaggggccgcagaccgcg
gtggtggtggggccggccggcgaggagatcttcaccgacaagtacggccgcgtgaaggtg
cagttccattgggaccgttacggccagcgcgacgagaagagcagttgctgggtgcgcgtc
agccagccctgggccggcaagaacttcggcttcatgcagatcccgcgcatcggccaggag
gtggtggtcgactttctggagggcgacccggatcagccgctgatcaccggccgcatctac
aacgccgagcagatgccgccgtgggatctgccggccaacgccacgcagagcggcgtgctg
agccgctcgtcgcaaggcggtgcctacggcaatgccaatgcactgcgcttcgaggacaag
aagggggccgagcagctctggctgcacgccgagaagaaccaggacatcgaggtcgagaac
gacgagacgcattgggtcgggcatgaccgcagcaagaccgtcgaccacgacgagcaggtg
cacgtcaagcatgaccgcaccgaggtggtcgaccacgacgaacagatcaccgttcaccac
gaccgcagggaacgtgtcgacaacgacgagtcgatcggcatcggccgtgaccgcaagatg
ctgatcgagcgcgacaagaccgagacggtcgcgcgcgacaagggcatccacatcggcggc
agccactccgagagcgtgggcggctcgatgagcgtctcggtggcgggcacgctgaccgag
tcggtgggcgtgaactacgccgagaccgtgggtggcgccatggaaatcaccgtgggcgcg
gtgatggccatcaccgtgggtggggccctcgccgagacggtggggggatccaagtcggcg
tcggtgggctcgggcaagtcagaaaccatcggcggcagcctgtcggtgacggtcgccaag
gatgtcaccgagtcgatctcgggcaaccggaccgtgaccgtccacaagaaccttacgcaa
gcggtcaagggcgatcaggtggtcgaggtcaccaagaacgcgtcggtcaaggccaagaag
atccagctcgtggccgacgacgagatcagcttgaagaccggcagcgccgagatcacgatg
aagaagaacggcgacatcaccatcaagggcaacaagatcaccgtcaagggcgacagcgac
gtcatcctcaagggcagcaagatcgcggagaactga

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