KEGG   Leptothrix cholodnii: Lcho_4117
Entry
Lcho_4117         CDS       T00681                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
lch  Leptothrix cholodnii
Pathway
lch02020  Two-component system
Brite
KEGG Orthology (KO) [BR:lch00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Lcho_4117
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:lch02022]
    Lcho_4117
Two-component system [BR:lch02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   Lcho_4117
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase AAA_16 AAA_2 HTH_50 AAA_22 MCM PDE8A_N ATPase AAA_7 Myosin_head
Other DBs
NCBI-ProteinID: ACB36369
UniProt: B1XXQ0
LinkDB
Position
complement(4623181..4624578)
AA seq 465 aa
MSDLNVLVVDDEPAVRQVLSAAIGKAGYPVEMAGSAAEALAKLDKTPFDVVLSDVFMPIT
DGIELLRQARTRGHNATFIMVTAFSSVDSAIDAIKAGAWDYITKPVRNEEIVHRLEQIDA
LRGLREENRALRSLVLGGGQPAFQFNSPAMQATERLISRVAPTDSTVLISGESGTGKGVT
ARRIHELSPRRDGPFVAVNCGAIPENLIESELFGHTKGAFTSADRARRGLFMQADRGTIF
LDEIGELPLSMQTKLLHVIEAKEVRPLGAEQSRKVDVRIIAATNRDLPAFVAQGRFREDL
FFRLSVFQIGMPALRERRADIPGLMRHLMAQRELPSGSGASAGQALTIDPEAEDMLIAFS
WPGNVRQLENVLHRAAILADGGCIHAADLPPEVSRVPALGPASAPSAEASECSLRERVRR
FEVSLIRRAIEEAGGDRRLAAQRLGIGLSSLYRKLDEFGADPAAG
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgtccgatctgaatgtgctggtcgtcgacgacgagccagccgtcaggcaagtcctgtcc
gccgccatcggcaaggccggttacccggtcgagatggccggcagtgccgccgaagccctg
gccaagctcgacaagacgcccttcgacgtagtcctgagcgatgtcttcatgccgatcacc
gacggcatcgagttgctgcgccaggcgcgcacgcgcggccacaacgccaccttcatcatg
gtgacggccttcagctcggtcgactcggcgatcgacgccatcaaggccggcgcctgggac
tacatcaccaagccggtccgcaacgaggagatcgtgcaccggctggagcagatcgacgcg
ctgcgcggcctgcgcgaggaaaaccgcgccctgcgcagcctggtgctgggcggcggccag
ccggcgttccagttcaactcgccggccatgcaggccaccgagcgcttgatcagccgggtc
gcgccgaccgacagcacggtgctgatcagcggcgagagcggcaccggcaagggcgtgacg
gcgcgccgcatccacgagctgtcaccgcgccgcgacgggccgttcgtggctgtcaactgc
ggcgccatccccgagaacctgatcgagagcgagctgttcggccacaccaagggcgccttc
accagtgccgatcgggcgcgccgcggcctgttcatgcaggccgaccgcggcaccatcttc
ctcgacgagatcggcgagctgccgctgtcgatgcagaccaagctgctgcacgtgatcgag
gccaaggaggtgcggccgctgggcgccgaacagagccgcaaggtcgacgtgcgcatcatc
gccgccaccaaccgcgacctgccggcgttcgtggcgcaggggcgcttccgcgaggacctg
ttcttccgcctgtcggtgttccagatcggcatgccggcgctgcgcgagcggcgcgccgac
atccccggcctgatgcggcatctgatggcgcagcgcgagctgccgtcgggctccggcgcc
agtgcaggccaggcgctgaccatcgaccctgaggccgaggacatgctgatcgccttcagc
tggcccggcaacgtgcgccagctcgagaacgtgctgcaccgcgccgccatcctggccgac
ggcggctgcatccacgccgccgacctgccgcccgaggtgtcgcgggtaccggcgctcggc
ccggccagcgcgccgagcgccgaggccagcgagtgcagcctgcgcgagcgggtgcggcgc
ttcgaggtctcgctgatccggcgcgccatcgaggaggccggcggcgaccgccgcctggcc
gcgcagcggctgggcatcgggctgtcgagcctgtaccgcaagcttgacgagttcggcgcc
gatccggccgcaggctga

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