Leptothrix cholodnii: Lcho_4158
Help
Entry
Lcho_4158 CDS
T00681
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lch03000
]
Lcho_4158
Transcription factors [BR:
lch03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Lcho_4158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_11
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACB36409
UniProt:
B1XXU0
LinkDB
All DBs
Position
4661533..4662462
Genome browser
AA seq
309 aa
AA seq
DB search
MNYKHLHYFLQVAKLGGVLRASEQLHLSPQTISGQIQLLEEALGTPLFARSGRGLALTEA
GRMVLGYAEDIFSIGTELAEAVRDFPRQGKLLALRIGVADAVPKAIACRLIEPATQLPEP
VRIVCREWKLDTLLAELALHRLDLVIADAPIPRDVSVRAFNHRLGSSGVSFFAAPSLLAS
CTGPFPACLDGAPLLLPAEESAVGQRLRAWLHARSLRPRVVGECDDSALAKEFGRRGMGI
FVGSTVLERDIEKQYGVRVLGAAPEVMEEFFAITVERRITHPCVTAITEAARNELFAPPA
RRRARPAAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaactacaagcacctccactacttcctgcaggtggccaagctgggcggcgtgctgcgc
gccagcgagcagctgcacctgtcgccgcagacgatcagcgggcagatccagctgctcgaa
gaggcgctcggcacgccgctgttcgcccgcagcgggcgcggcctggcgctgaccgaggcc
gggcgcatggtgctcggttacgccgaggacatcttctcgatcggcaccgagctcgcggag
gcggtgcgcgactttccccgccagggcaagctgctggccttgcgcatcggcgtggccgac
gccgtgccgaaggcgatcgcctgccggctgatcgagccggccacgcagctgcccgagccg
gtgcgcatcgtctgccgcgaatggaagctcgacacgctgcttgccgagctggccctgcac
cggctggacctggtgatcgctgatgcgccgatcccgcgtgacgtcagcgtgcgcgccttc
aaccaccggctgggcagcagcggcgtcagcttcttcgcggcgccgtcgctgctggcgtcg
tgcacggggccttttccggcctgcctggacggcgcgccgctgctgctgccggccgaggag
tcggcggtcggccagcgcctgcgggcctggctgcatgcgcggtcgctgcgcccccgggtg
gtcggcgagtgcgacgacagcgccctggccaaggagttcgggcgccgcggcatgggcatc
ttcgtcggctccaccgtgctcgagcgcgacatcgagaagcagtacggcgtgcgcgtgctc
ggcgcggcgcccgaggtcatggaggagttcttcgcgatcacggtcgagcgccgcatcacg
catccgtgcgtgacggcgatcaccgaggcggcccgcaacgagctgttcgcaccgcccgca
cggcggcgtgcccggcccgccgccgcctga
DBGET
integrated database retrieval system
