Leptothrix cholodnii: Lcho_4264
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Entry
Lcho_4264 CDS
T00681
Name
(GenBank) protein of unknown function DUF344
KO
K22468
polyphosphate kinase [EC:
2.7.4.34
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00190
Oxidative phosphorylation
lch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Lcho_4264
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Lcho_4264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lch03019
]
Lcho_4264
Enzymes [BR:
lch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.34 GDP-polyphosphate phosphotransferase
Lcho_4264
Messenger RNA biogenesis [BR:
lch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Lcho_4264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPK2
Motif
Other DBs
NCBI-ProteinID:
ACB36515
UniProt:
B1XZF2
LinkDB
All DBs
Position
complement(4772223..4773155)
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AA seq
310 aa
AA seq
DB search
MSELPNHDELVERIQRDLIDSYDEELELEIEDRDASGYLSDGAEAASEPADLRKARRMAY
FRELFRLQGELVKLQDWVAHTRRKVVILFEGRDAAGKGGVIKRITQRLNPRVCRVVALPA
PNDRERTQWYFQRYAAHLPAAGEMVLFDRSWYNRAGVERVMGFCSDDEYEEFFRSVPEFE
RMLVRSGIVVLKYWFSITDDEQHLRFLGRIHDPLKQWKLSPMDLESRRRWEEYTKAKETM
IERTHIAEAPWWVVQAVDKKAARLNCIQHLLGQFDYHEVERPTVVLPERVRNPDYIRQPV
PGDMIVPEFY
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactgccgaatcacgatgaactggtcgagcgcatccagcgcgacctgatcgac
agctacgacgaagagctcgaactcgagatcgaggaccgcgacgcgtcgggctatctcagc
gatggcgccgaagcggccagcgagcccgccgacctgcgcaaggcccggcgcatggcctac
ttccgcgagctgttccgcctgcagggcgaactcgtcaagctgcaggactgggtggcgcac
acgcgccgcaaggtggtgatcctgttcgagggccgcgacgccgccggcaagggcggcgtg
atcaagcgcatcacgcagcgcctgaacccacgtgtgtgccgcgtggtggctctccccgcg
cccaatgaccgcgagcgcacgcagtggtacttccagcgttacgccgcgcacctgcccgcc
gccggtgagatggtgctgttcgaccgcagctggtacaaccgcgccggtgtcgagcgggtg
atgggcttctgcagcgacgacgagtacgaggagttcttccgctcggtgcccgagttcgaa
cgcatgctggtgcgctcgggcatcgtggtgctcaagtactggttctcgatcaccgacgac
gagcagcacctgcggtttctgggccgcatccacgacccgctcaagcagtggaagttgagc
ccgatggacctcgaatcacggcgccgctgggaggagtacaccaaggccaaggagaccatg
atcgagcgcacccacatcgccgaggcgccgtggtgggtggtgcaggcggtcgacaagaag
gccgcccggctcaactgcatccagcacctgctcggccagttcgactaccacgaggtcgag
cgcccgaccgtggtgttgcccgagcgggtgcgcaaccccgactacatccgccagccggtg
cccggcgacatgatcgtgcccgagttctattga
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