Leptothrix cholodnii: Lcho_4271
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Entry
Lcho_4271 CDS
T00681
Name
(GenBank) TRAP dicarboxylate transporter, DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lcho_4271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_4271
Transporters [BR:
lch02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Lcho_4271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
SpoU_sub_bind
Microcephalin
Motif
Other DBs
NCBI-ProteinID:
ACB36522
UniProt:
B1XZF9
LinkDB
All DBs
Position
4779722..4780714
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AA seq
330 aa
AA seq
DB search
MQRNQFTRTLLALAAGALLSPMAVQAQTVKLTLGHGAAPGNPRHEAAVKFAEVLKAKTGG
RIEVQVAPSAQLGDDAAMVTALRTGALDMSANSQGAVANAVPEYAAYGMPFLFSNAAQAF
KLLDGPLGKELSDKTAAKGLVVLGYWDNGIRHMTNSKRAITQVEDMKGLKMRTPPDAVLV
DIMQSLGAEAQQIKFAELYVALQQGVVDGQENPLVNIHASKLYEVQKHLALTSHMFQMTP
FLMSKRTWDRLSEADRKAVTEASAEATALQRKQSQEVDDKLLGELKAKGVQVTTVDKAAF
EKATAAVDDKWLAMPIGPYVKKVIAAARAK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcaatcaattcacccgcacccttctggccctggcggccggcgccctcttatcc
ccgatggcagtgcaggcgcagaccgtcaagctgacgctgggccacggcgcggcaccgggc
aatccgcgccacgaagccgcggtgaagttcgccgaggtgctcaaggccaagaccggcggg
cgcatcgaggtgcaggtcgcaccgtcggcccagttgggcgacgatgccgcgatggtgacg
gcgctgcgcaccggcgcactcgacatgtcggccaactcgcagggtgcggtcgccaatgcg
gtgcccgagtacgccgcttacggcatgccgttcctgttctcgaacgcggcgcaggccttc
aagctgctcgacggcccgctcggcaaggagctgagcgacaagaccgcagcgaaggggctg
gtcgtgctcggctactgggacaacggcatccgccacatgaccaacagcaagcgggcgatc
acccaggtcgaggacatgaagggcctgaagatgcgcacgccgcccgacgcggtgctggtc
gacatcatgcaatcgctcggtgccgaggcgcagcagatcaagttcgccgagctctacgtg
gcgctgcagcagggcgtggtcgacgggcaggagaacccgctcgtcaacatccacgccagc
aagctctacgaggtgcagaagcacctggcgctgaccagccacatgttccagatgacgccc
ttcctgatgagcaagcgcacctgggaccggctgtccgaggccgatcgcaaggccgtcacc
gaggcctctgccgaggccaccgcgctgcagcgcaagcagtcccaggaggtcgacgacaag
ctgctcggcgagctcaaggccaagggcgtgcaggtcaccacggtcgacaaggccgccttc
gagaaggccaccgccgcggtggatgacaagtggctggcgatgccgatcggcccgtacgtc
aagaaggtcatcgcggccgctcgcgccaagtga
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