KEGG   Leptothrix cholodnii: Lcho_4338
Entry
Lcho_4338         CDS       T00681                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
lch  Leptothrix cholodnii
Pathway
lch02020  Two-component system
Brite
KEGG Orthology (KO) [BR:lch00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Lcho_4338
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:lch02022]
    Lcho_4338
Two-component system [BR:lch02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   Lcho_4338
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_16 Mg_chelatase HTH_50 AAA AAA_22 RsmI_C MCM HTH_30 OKR_DC_1_N
Other DBs
NCBI-ProteinID: ACB36589
UniProt: B1Y0B0
LinkDB
Position
complement(4853580..4854950)
AA seq 456 aa
MSEATPEAAAIRVIYVEDDEDVRAGSAQALELAGLAVDAFGSVEAARARIRAGVPAVVLS
DVQLPGSSGTEWLDQIRAIDAELPVILVTGHGDIAMAVQAMRRGAYDFIAKPYSSDQLVT
VVRRAAEKRRLTLQVQALRDEMDTWHGIQALLLGRSAQMQKVRRTVMNLASTSADVVIYG
ETGTGKDLVARCLHDHSDRRRAHYVPLNCGGLPEALAESELFGHEVGSFTGATRQRIGKF
EHAHGGTLFLDEIESMPMAVQIKLLRALQERSIERVGSNTPVAVNCRVIAAAKQDLKRLS
DQQKFRADLYYRIGVAFIELPPLRERREDIPLLFEHFTLQAAGRYQRSAPSLSGAQLAEL
MAHPWPGNVRELHNVADRFVLGLLGERLELAAQDQAQPSKLPEQIEQFERVMISEALKRQ
HGDVALAAKALGLPKQTLYDKLRRLRISTDSFKPEG
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgagtgaagccacccccgaagccgccgccatccgcgtcatctacgtcgaggacgacgag
gacgtgcgcgccggcagcgcccaggcactcgaactcgccggcctggcggtcgacgccttc
ggctcggtcgaggcggcgcgtgcacgcatccgcgccggcgtgccggcggtggtgctgagc
gacgtgcagctgcccggcagcagcggcaccgagtggctcgatcagatccgcgccatcgac
gccgagctgccggtgatcctggtcaccggccacggcgacatcgcgatggcggtgcaggcg
atgcggcgcggcgcctacgacttcatcgccaaaccgtattcgtccgaccagctggtgacg
gtggtgcggcgcgccgccgaaaaacgccgcctgacgctgcaggtgcaggcgctgcgcgac
gagatggacacctggcacggcatccaggcgctgctgctgggccgctcggcgcagatgcag
aaggtgcggcgcacggtgatgaacctggcctcgacctcggccgacgtggtgatctacggc
gaaaccggcaccggcaaggacctggtggcacgctgcctgcacgaccacagcgaccgccgc
cgcgcccactacgtgccgctcaactgcggcggcctgcccgaggcgctggccgagagcgag
ctgttcggccacgaggtcggctcgttcaccggcgccacccgccagcgcatcggcaagttc
gaacatgcgcacggcggcacgctgttcctcgacgagatcgagagcatgccgatggccgtg
cagatcaagctgctgcgcgcgctgcaggagcgcagcatcgagcgagtgggttcgaacacg
ccggtggcggtgaactgccgcgtgatcgccgcggccaagcaggatctgaaacgcttgagt
gatcagcagaagttccgcgccgacctctactaccgcatcggcgtggccttcatcgagctg
ccgccgctgcgcgagcggcgcgaggacatcccgctgctgttcgaacatttcacgctgcag
gccgccgggcgctaccagcgcagcgcgccttccctcagcggcgcacagctggccgaactg
atggcgcacccctggcccggcaacgtgcgcgagctgcacaacgtggccgatcgcttcgtg
ctcggcctgctcggcgagcgtctcgaactggccgcgcaggaccaggcccagccgagcaag
ctgcccgagcagatcgagcagttcgagcgcgtcatgatcagcgaggcgctcaagcgccaa
cacggcgacgtggcactcgccgccaaggcgctcggcctgcccaagcagacgctctacgac
aagctgcgccggctgcgcatcagcaccgacagcttcaagccggaaggctga

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