Lacticaseibacillus chiayiensis: KG086_02715
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Entry
KG086_02715 CDS
T07576
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lchi
Lacticaseibacillus chiayiensis
Brite
KEGG Orthology (KO) [BR:
lchi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lchi03400
]
KG086_02715
DNA repair and recombination proteins [BR:
lchi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KG086_02715
Archaeal homologous recombinant proteins
KG086_02715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
nSTAND3
ABC_tran
Rad17
AAA_18
DUF5906
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QVI35272
LinkDB
All DBs
Position
581360..584485
Genome browser
AA seq
1041 aa
AA seq
DB search
MKLKQLHMRFFGPYADETVDFDDFRTSPLFLISGPTGSGKTTIFDALMYALYGETSGERD
GVQMRSNFASHHNLTKVTLTFEHDGKLYSVTRQPQQLQQKKRGDGLTEIKAKVMLAIANA
DKQVAEYTKKNQVQAQLDEVLHLDAKQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGT
QLIQRWQAAMLAKTKKQGAKIQDQERLLNLLTSQFDFEVAPDENATPADKLDLMRENVEK
QAATVAERQKTADSSHHAYRVAQASLQAGRQLAQAFKDRELTTAALAKLAEQEPTQRDRL
KLMDQLTWVQQHEAAAQQVESTKQDLDAAKKQSAQTNAALVTTQQAMAQAKAKLSDLQQQ
APAVEAKKKQLDQLQSVREQLVAMTTQKQQAAKQADAVAKAESALAQAQQKLADDQQALA
QQQTELSGLSVADLANQAADQKQLMAMLTPIATNYQEAQADAAALEKKLAMVKTSLAEAT
KASETTAQQLTDLQQTQIKQQIARLAAKLKPGTPCPVCGSLEHPHPAVTTTEPLVTETAI
KQAEQNRQQAAAKATTLQTQLKNLEEQQATADKKVNAAQQDFLEKLAEVPNLVNQDIERG
NILQQLDALKIVTDKTVKALKTAKAKQTALEETLKATQAVVAQDEEKVQTAQGTFNAAKL
EAAKATSALATMQAALPEGTSDLATVTAQSKELTQAVNDYQEQQQAAQDRVNELDRQLAG
LHADARHATEQIAKLEKEHQKAATDFLAAVTEYFGENGSEQFAALQKQLPQLPDLQQQTQ
AYKDAVLQQKTLQDASNKTIGDQQEPALDQLEEQAKLTEEAATKAQTAFIEVKQTYDTAK
KLLKQASDILAENQAALAAFADLQTLTTVMNGNGPKKLSLERYVLQAYLQQILDVANTRL
QVLSNNRYQFVLHTDLGTQKIHSGLEIDVYDDQVGEQRAVQTLSGGESFIAALSLALALG
EVIQQESGGINIDALFVDEGFGSLDTNSLDVAMNALESLEGESRLIGIISHVTELRDNIP
DQLQVQPAGTGRSRLKVMHMA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaacaattacacatgcggttttttggcccgtatgctgatgaaacggttgat
tttgacgactttcggaccagtccgttgtttttgatcagtggaccgaccggcagtgggaag
accacgatttttgatgccttgatgtatgccttgtatggggaaacttcaggcgagcgtgat
ggcgttcagatgcggtcgaattttgccagtcatcataatttgacgaaagtgacgttgacg
tttgaacatgacggcaaactttattcggtgacccgccagccgcaacagctgcaacaaaag
aagcgcggggatgggctcacggagattaaagctaaagttatgttggcgatcgcaaatgct
gacaagcaggtggcggaatataccaagaagaatcaggtgcaggcgcaattagatgaagtt
ttgcacttggacgccaaacagtttcgccagattgtgttgctgccgcaaggggattttcgg
cgctttttggatgcggacagtaatgctaaggaagacttattgcgcgacttgtttggcacg
caactaattcaacggtggcaggcggcgatgctggcaaaaaccaagaagcaaggcgcaaaa
atccaggatcaggagcggctgctcaatcttttgacatcgcaatttgatttcgaagtcgcg
ccagatgaaaatgccacgccggcggacaagcttgacttgatgcgggaaaatgtcgaaaag
caagcggcaacggttgcggaacgacaaaaaacggctgacagcagccatcatgcttatcgt
gttgcgcaggcatcgcttcaggcaggcagacagttggcacaagcatttaaagaccgcgaa
ctgaccaccgctgccttggcaaaactcgctgagcaggaaccgactcagcgggatcggctg
aaactcatggatcagttaacttgggtgcaacaacacgaggcagctgcccaacaagtcgaa
agtacgaaacaggacctggatgcggcgaaaaagcaatccgcacagacaaacgcggctttg
gtgaccactcaacaggccatggcgcaggctaaagccaagttaagcgatttacagcaacaa
gcgcctgccgttgaagccaagaaaaagcagctcgatcaattgcagtcggttcgggaacag
ttagtcgccatgacaacgcaaaagcagcaggcggcaaagcaagccgatgcagttgcaaaa
gcagagagtgctctggcacaggcacaacaaaagcttgctgacgatcagcaggcgctcgcg
cagcaacaaaccgagttgtctgggctgtcagtggccgatttggcgaaccaagcagctgac
caaaagcagttaatggcaatgttgacgccgattgcgaccaactatcaggaagcccaagct
gacgccgccgcgctagagaaaaagctggcaatggtcaaaacttcgctggctgaagccaca
aaagccagtgaaacgacagcgcagcaattaaccgatctgcagcaaacccaaatcaagcag
caaattgcccggttggcggctaagttaaaacctggcacgccttgtcccgtttgtggcagc
cttgaacatccgcatcctgccgtaactacgactgaaccactggtaaccgagacggcgatc
aagcaggcagaacaaaaccggcaacaggcagcggcaaaagcgaccacgctacaaacccag
ctcaagaatcttgaagaacagcaggcaactgcggataaaaaagtcaatgcagcgcagcaa
gattttcttgaaaagctggcagaagttcccaaccttgttaatcaagacattgagcgcggc
aatattttgcaacagctagatgcgcttaagattgttactgataagacagtcaaggcactg
aaaactgccaaagcaaaacaaaccgcattggaagaaacgctgaaggcaacacaagcagtc
gtggctcaggatgaggaaaaggttcagaccgcgcaagggacatttaacgccgccaagctt
gaggctgccaaagccacgagtgcattggcgacgatgcaagcggcattgccggaaggaaca
agcgatctggcgacggtgacagcacagtcgaaagaactgacccaggcggttaacgattat
caggagcaacaacaagctgcgcaggatcgcgtcaacgagttagatcgacagttggctgga
ttacatgccgatgcacgccacgccacggaacaaattgccaagctggaaaaagagcatcaa
aaagcggcaacggactttttagcagccgtgacggaatattttggcgaaaatggttctgaa
cagtttgccgcattgcaaaagcagttgccacaattgccggatctgcaacagcaaacgcag
gcttataaggatgcggtgttgcagcagaagacgttacaggacgctagcaataaaaccatc
ggcgatcaacaggaaccggcacttgatcagcttgaagagcaggctaagctcacggaagaa
gccgcaacgaaggctcagacggcgtttatcgaagtgaagcagacctatgacacggcgaaa
aagttattgaagcaggcgtcggatattttggcagaaaaccaagcggccttggctgccttt
gctgacctgcagacattgacaacggtgatgaatgggaacggtcctaagaagctaagtttg
gaacggtatgttttgcaagcctatctccagcagattctagatgttgccaacacccgcctg
caggtgctttccaacaatcgttatcaatttgtgctgcatactgatttaggcacccaaaag
attcactcaggcttggaaatcgatgtttatgatgatcaagttggcgaacagcgcgcggtt
cagacgctatccggcggcgaaagctttatcgcggcgcttagtctggcattggcattaggt
gaggtcattcaacaggaaagtggcggcatcaacattgatgctttgtttgttgacgaaggg
ttcggtagtttggataccaatagccttgatgtggctatgaatgcccttgagtcattggaa
ggcgagtcgcggttgatcggtattatttcccacgtcacggaattacgcgataacattccc
gatcagcttcaggtacagccggccggaaccgggcgtagtcggttgaaagtgatgcatatg
gcgtag
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