Lacticaseibacillus chiayiensis: KG086_03135
Help
Entry
KG086_03135 CDS
T07576
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lchi
Lacticaseibacillus chiayiensis
Brite
KEGG Orthology (KO) [BR:
lchi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lchi03019
]
KG086_03135
03009 Ribosome biogenesis [BR:
lchi03009
]
KG086_03135
Enzymes [BR:
lchi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KG086_03135
Messenger RNA biogenesis [BR:
lchi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KG086_03135
Ribosome biogenesis [BR:
lchi03009
]
Prokaryotic type
rRNA helicases
KG086_03135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
PRA-PH
Motif
Other DBs
NCBI-ProteinID:
QVI35345
LinkDB
All DBs
Position
663060..664406
Genome browser
AA seq
448 aa
AA seq
DB search
MENQFKQYQIKPFVIAGLDAMGITQPTPIQKKVIPALLRGENLVGQSQTGSGKTHAFLVP
LLSMVDPEQDATQVVITAPSRELANQIYAVAQQLTQTEPAIRISRLVGGMDKQKQIDKLQ
HRQPHVAIGTPGRILDMIKRYDLVPASVRHFVVDEADMTLDMGFLETVDAIASSFPENLQ
MAVFSATIPQKLEPFLRKYMHHPTMIELKPQSVIADTVENILIAAKGQDKNELIYQLVTM
GHPFLVLIFANTKTSVDAIHDYLKHQGLKVAKIHGGVQPRERRRIMKEVADLKYQYVVAT
DLAARGIDIKGVSMVINAEIPRDLEFFIHRVGRTGRNGMAGTAITLYEPGQEDQVAELEH
MGIKFEPKTLHKGELVDTYDRNRRVHRKPKQEETSLAMRGLVKKAKQKHMPNYRKKIRTA
ALLERKRNAKVARREALLAEKRKNRKRG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaatttaaacaataccaaatcaagccgttcgtgatcgcaggcctggatgct
atggggatcacgcagccgacgccgattcaaaaaaaggtgattccggccctgttgcgcggg
gagaatcttgtgggtcagagtcagacaggcagcgggaaaacccacgcctttttggtaccg
ttgcttagcatggtcgatcctgaacaagatgcaacccaggtggtcatcacggcaccttcc
cgtgagctggccaatcagatttatgcggttgcccaacaattgacccaaacggaaccggct
attcggattagtcggttagtcggtgggatggacaagcaaaagcagattgacaaactgcag
catcgtcagccacatgttgccattggcacaccggggcggattctagacatgataaaacgt
tatgacctagtgccggcttcggttcgtcattttgtcgttgatgaagcagatatgacgttg
gacatgggttttcttgagactgtcgatgcgattgcgtccagttttccggaaaatttgcag
atggccgttttttccgccaccattccccaaaagctcgagccgttcctgcgtaaatacatg
caccaccccacgatgattgaactcaaaccacagtccgtcattgccgacactgttgagaat
atcctgattgctgctaaagggcaggataaaaacgaactgatttaccagcttgtcacgatg
ggccatccatttctggtgttgatttttgccaataccaaaaccagcgttgatgcgattcat
gattacctgaaacatcaagggttgaaagttgccaagattcatggtggcgtccaaccgcgt
gaacgccggcgcatcatgaaagaggtggccgatcttaaatatcaatatgtggttgcgact
gatttggctgcgcgtgggattgatatcaaaggggtttcgatggtaattaatgccgagatt
ccgcgggatttggagttctttattcaccgcgtggggcggaccggacgaaacggcatggcc
ggtacggcgatcacgctttatgaaccgggtcaagaagaccaggtcgccgagttagagcat
atgggcatcaagtttgagcctaagaccctacacaaaggcgaactggttgacacgtatgac
cggaatcggcgagttcaccgtaagcctaagcaggaggaaacgagtctggccatgcgcggt
ttagtcaaaaaagccaagcagaagcatatgccaaactatcgtaagaaaattcgcaccgcc
gctttactggaacgcaaacggaatgccaaagttgctcgtcgcgaagccttattagccgag
aaacgtaaaaaccgcaaacgaggataa
DBGET
integrated database retrieval system
