Lacticaseibacillus chiayiensis: KG086_07320
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Entry
KG086_07320 CDS
T07576
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
lchi
Lacticaseibacillus chiayiensis
Pathway
lchi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lchi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KG086_07320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lchi02022
]
KG086_07320
Two-component system [BR:
lchi02022
]
NarL family
LiaS-LiaR (cell wall stress response)
KG086_07320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
DUF6115
HTH_40
HTH_23
HTH_38
GH3
DUF742
TadZ_N
HTH_24
FemAB
SF1-HH
HTH_27
DUF2293
Motif
Other DBs
NCBI-ProteinID:
QVI33642
LinkDB
All DBs
Position
complement(1541988..1542653)
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AA seq
221 aa
AA seq
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MIKVLIVDDHEMVRLGLATYIGVQPDLEVVDQAENGQEGVDMALKDRPDIILMDLVMPVK
DGITATKEILKAWPQARIIILTSFIDDAKVYPAMEAGAASYILKTATAEEIAKAIRQTAK
GERVLEPQVTTKMMNRMNHPQPQYDELTNREREVLQLIAQGKSNQEIASALFITLKTVKT
HVSNILAKLDVEDRTQAAIYALKHGLVKNDQGDDGVATRDH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagtattgatcgttgatgatcacgaaatggttcgattgggactggcgacgtat
attggcgttcagcctgacttagaggtggtcgatcaagctgaaaacggccaggaaggtgtc
gatatggctttgaaggatcggcctgatattatcttgatggatctggtaatgccggtaaaa
gatggtatcacggcaaccaaggagatcctgaaagcatggcctcaagcgcggattatcatt
ttgaccagtttcatcgatgatgccaaagtatatccagccatggaggcaggggcggcaagc
tatattcttaaaaccgcaacggcggaagaaattgccaaagccattcgtcagactgctaag
ggcgaacgggtactggagccgcaagtgaccaccaaaatgatgaaccgcatgaaccatccg
caaccgcagtatgacgaactgacgaaccgtgaacgtgaagttttgcagttgattgcgcag
ggtaagtcgaatcaggaaattgcctcggcgctatttattactttaaaaacggttaaaacg
cacgtctcaaacatattagccaagttggatgtcgaggaccggacccaagcagcgatttat
gcactcaagcatggtctggtcaaaaatgatcaaggagatgatggggttgcaactcgcgat
cactga
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