Lacticaseibacillus chiayiensis: KG086_07525
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Entry
KG086_07525 CDS
T07576
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lchi
Lacticaseibacillus chiayiensis
Pathway
lchi03030
DNA replication
lchi03410
Base excision repair
lchi03420
Nucleotide excision repair
lchi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KG086_07525 (polA)
03410 Base excision repair
KG086_07525 (polA)
03420 Nucleotide excision repair
KG086_07525 (polA)
03440 Homologous recombination
KG086_07525 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lchi03032
]
KG086_07525 (polA)
03400 DNA repair and recombination proteins [BR:
lchi03400
]
KG086_07525 (polA)
Enzymes [BR:
lchi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KG086_07525 (polA)
DNA replication proteins [BR:
lchi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KG086_07525 (polA)
DNA repair and recombination proteins [BR:
lchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KG086_07525 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KG086_07525 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QVI33681
LinkDB
All DBs
Position
complement(1579554..1582199)
Genome browser
AA seq
881 aa
AA seq
DB search
MTSQTKLLLIDGNSIAFRAFFALYNQLDRFTNQDGLHTNAIYAFNNMLEIVLKSVQPDAA
LVAFDAGKTTFRTAKYADYKSGRAKTPSELLEQLPYIKELLDDMGIQHYELKDYEADDII
GTMAKRADDAGWQTTIVTGDRDLTQLTTDQTTVQVTVKGVNELEAYTPEHVKEKLGITPT
QIIDLKGLMGDTSDNYPGVTKVGEKTALKLLKQYGSIDNLYANIDEMKTSKLKENLINDK
DKAYLSKQLATIDRDAPVTVDLADVAYSGPDLAKLRDFYAKMNMNSLLKKIGGDVTKPTQ
PVHFSVLDDKSVLALTKITEPLTFEIEMLTDNYHIADQIGFFIGTKDETYVSTDVSLLTI
PEVAKWLGDSKRDLTVFDGKRNIVAAHRLGLKLPDIAFDVLLASYLINPDENSNDLGKIA
EDHDYHDLPRDEDVYGKGAKRQVPEDKKLFAQFARKSMALFALRPDLTEDLAKQEQTDLF
TDMEMPLARVLAEMEIQGITLDAQTLKDMGAEFSQSIKVLEEKIYGEAGVKFNLNSPKQL
GEILFEKLNLPVIKKTKTGYSTSVDVLNELKSASPIVQDILDYRGWSKLNSTYVVGLLKA
QMPDHKIHTRYLQTLTQTGRLSSVDPNMQNIPARDEGKIIRKAFVPSHPDWQIFSSDYSQ
IELRVLSHISGDENMQQAFKNGVDIHANTAMKIFGLDSPDQVTPDMRRQAKATNFGIVYG
ISDYGLAQNIGISRKQAKAFIDGYFEQYPKVHDYMTNMVKKAREDGYVETLFHRRRYLPQ
IHSRNFNLRKFAERTAMNTPIQGSAADIIKVAMIRMQQALANAHLQAKMLLQVHDELIFE
APTAEMEQLSKLVPKIMDSAVQLAVPLKVDSHYGPTWFDAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcagactaagttattactgattgacggcaactcgattgcgtttcgcgctttt
tttgccttatacaatcagctcgatcggttcaccaatcaggatgggctacacaccaatgcc
atttacgccttcaacaacatgctcgaaattgtgttgaaatcggttcagccagatgcggct
ctggtagcctttgatgccggtaagacaacgttccgaactgcgaaatatgctgattataaa
agtggccgggccaagacgccaagcgagttactggaacagctgccgtatattaaagaattg
cttgacgacatgggcattcagcattatgaattaaaagattatgaagctgatgacatcatc
ggaaccatggcgaagcgtgcagacgacgctggctggcaaacgacgatcgtgacgggcgac
cgggatttgacccagttgaccactgaccagaccacggtgcaagtgaccgtcaaaggcgtc
aatgagcttgaggcgtatacgccggaacatgtcaaagaaaagctgggtattacacccacg
cagataatcgacctgaaaggcttgatgggtgacacctctgacaattatccgggggttacc
aaagtcggcgaaaaaaccgcattgaaattgttgaagcagtatggcagcattgacaacctt
tatgccaacattgacgagatgaaaacgtcaaaactgaaagaaaaccttattaatgacaag
gacaaggcctatcttagtaagcaacttgccacgattgatcgggacgcccctgttacggtc
gacttggctgacgtggcttattccgggcctgatttagccaagttgcgagatttttatgcc
aagatgaacatgaactcgttattgaaaaagatcggcggagatgtgactaagcccacgcag
ccggttcatttttcggtactggatgacaagtccgtcttggctctaacgaaaatcacggaa
ccacttacttttgaaatcgaaatgttgaccgacaattatcatatcgccgatcagatcggc
ttcttcattggcacgaaagatgaaacatatgtcagcacggatgtctctttgctgaccatt
ccggaagtggctaagtggcttggcgattcgaagcgcgacttaacagtatttgatggtaag
cgcaatatcgtggccgctcatcgtttagggttaaagctaccagacatcgcgtttgacgtt
ttattggcctcttatttgatcaatccagatgaaaatagcaatgatttaggcaaaattgca
gaagaccacgactatcatgacctgccacgggacgaagatgtttatggtaaaggagccaag
cgccaagtaccggaagataaaaagctgttcgcccagtttgcccgcaagtcaatggcgctc
tttgccctacgtcctgacttaaccgaagatttggccaagcaggaacagaccgatcttttc
acggatatggaaatgcctttagcgcgggtgttggcagaaatggagattcagggcattacg
cttgatgcgcaaaccttgaaagacatgggtgccgaattttcacaaagtattaaggtgttg
gaagaaaagatttacggcgaggctggcgttaagttcaatttgaattcgccgaagcaactg
ggcgaaatcttatttgaaaagctgaatttgccggtcatcaaaaagaccaagacaggctat
tccactagtgttgatgtcctaaacgagctgaaatcagctagcccgatcgtccaggacatt
ctggattatcgcggctggtcgaagttgaattcgacgtatgttgtgggcttactgaaggcg
caaatgccggatcacaagattcatacccgttacctgcagacattaacccagacaggccgc
ttaagttccgttgatccgaacatgcaaaacattccggctcgcgacgaaggtaaaatcatt
cggaaggcatttgtgccgtcccatccggattggcagatttttagttcggactactcacaa
atcgaactgcgtgtcttgtcccatatttccggtgacgagaatatgcagcaagctttcaaa
aatggtgtcgatattcatgccaacaccgctatgaagatttttggcctagattccccggac
caagtcaccccggacatgcgccgacaagccaaggcgactaattttgggattgtctatggt
attagcgattacgggttagcacagaatatcggaatttcccgtaagcaagccaaagccttc
atcgatgggtatttcgagcagtacccaaaggttcacgattacatgacgaatatggttaaa
aaggcgcgtgaagacggttatgttgagacactatttcatcgtcgccgctatttgccgcaa
attcattcgcgcaactttaatttacgtaaatttgccgaacgcaccgcgatgaacacgccg
attcaaggcagtgcagcggacattattaaagttgcgatgattcgcatgcaacaagcatta
gccaacgcacacctccaagccaaaatgttattgcaggttcacgatgaactcatttttgaa
gcgcccactgcagaaatggagcagcttagcaagcttgtgccgaagatcatggactctgct
gtacagttggcggttccgttaaaagtcgatagccattacggtccgacttggtttgatgcg
aaataa
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