Leuconostoc citreum: LCK_01242
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Entry
LCK_01242 CDS
T00663
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lci
Leuconostoc citreum
Brite
KEGG Orthology (KO) [BR:
lci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lci03019
]
LCK_01242
03009 Ribosome biogenesis [BR:
lci03009
]
LCK_01242
Enzymes [BR:
lci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LCK_01242
Messenger RNA biogenesis [BR:
lci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCK_01242
Ribosome biogenesis [BR:
lci03009
]
Prokaryotic type
rRNA helicases
LCK_01242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_30
Flavi_DEAD
PrpR_N
AAA_22
Cyclophil_like2
Motif
Other DBs
NCBI-ProteinID:
ACA83067
UniProt:
B1MZW5
LinkDB
All DBs
Position
complement(1295597..1296961)
Genome browser
AA seq
454 aa
AA seq
DB search
MAEKANQFGQFNLKSDIISALTAIGFIQPTAVQAKLIPAVLQGHDVVGQSQTGSGKTHTF
LIPIINQLEQGKNYVQAVITTPSRELAAQITKAAKQFADKLPYEVTISEFVGGTDKLRQV
KQLENNQPQIIIGTPGRIKDLVSSGALKLHAVKTLVVDEADMTLDMGFLNEVDYIAGAMP
EKLQTLVFSATMPEKLKPFLKKYLDNPKFEAIPVSTVIAETIDNWLLATKSKDKNDVIYQ
ILSISNPYLALVFANTKDRAKEIASNLRSKGLKVAEIHGDIEPRERRRVMKAIQNLDYQY
VVATDLAARGIDIEGVSHVINDDIPGELEFFVHRVGRTGRNGMPGLAITLYGPDEEDEVV
ELESLGIDFKAKQIKDNQIIDVKDRRARKQRVATTKKLDPTMVGMVKKKKKIVKPGYKRR
IKSAIQRKNQMDRRISQREEMRAVRKANKKRGDA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagcaaaccaatttggacaatttaatttaaaatcagacattatttcagca
ctaacagctattggttttatacaaccaactgcagttcaggctaaattaatcccggccgtt
ttacaagggcacgatgttgttggccagtcgcaaacaggttcaggtaagacgcatactttt
ttgattccaattattaatcagttggagcaaggaaagaattacgtacaagcggtaattaca
acaccttcgcgtgaacttgctgcacaaattacaaaagcggcgaagcagtttgctgataag
ttgccttacgaggtaacaatttcggaatttgttggtggcacagataagctacgacaagtt
aaacaattggaaaataatcaaccacagattattattgggacaccagggcgtataaaagat
ttagtttcctctggtgcgctaaaattgcatgcagttaaaacattagttgttgatgaagcg
gacatgacattggatatgggtttcttaaatgaagtggactatattgcaggtgctatgcca
gaaaaattgcaaacgctagttttcagtgcaaccatgccagaaaaactcaagccgttctta
aaaaaatatttggataatcctaaattcgaagcaattcctgtttcaactgttattgccgaa
acaatcgacaactggttgctagctacaaaatcaaaagataaaaatgatgtcatttatcag
atcctaagtattagcaatccctatttagcacttgtttttgccaacacaaaggatcgcgcg
aaagagatagctagcaatttacgtagtaaaggtttaaaagtcgctgagattcatggggat
attgagccaagagaacgtcggcgcgtcatgaaagcgattcaaaacttagattatcaatat
gttgtggcaactgatttagcagctcgaggtattgatattgaaggtgtatcgcatgtgatt
aatgatgatatacctggtgaacttgaattctttgttcaccgtgttggtcgtacagggcgc
aatggtatgccaggattggcaattaccttgtatggaccagatgaagaagatgaagtagta
gagcttgaatcattgggaattgattttaaagcaaaacaaattaaagataatcaaattatt
gatgttaaagatcgtcgtgcacgtaaacagcgtgtggcaacgactaaaaagcttgaccca
acaatggttggcatggttaaaaagaaaaagaaaattgttaaaccaggttataagcgacga
attaaatcagctattcaacgtaagaaccaaatggatcgacgtatttctcaacgtgaagaa
atgcgtgcagtgcgtaaggctaacaaaaaacgtggtgacgcataa
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