Leuconostoc citreum: LCK_01438
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Entry
LCK_01438 CDS
T00663
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lci
Leuconostoc citreum
Pathway
lci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCK_01438 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lci03019
]
LCK_01438 (groEL)
03110 Chaperones and folding catalysts [BR:
lci03110
]
LCK_01438 (groEL)
03029 Mitochondrial biogenesis [BR:
lci03029
]
LCK_01438 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lci04147
]
LCK_01438 (groEL)
Enzymes [BR:
lci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LCK_01438 (groEL)
Messenger RNA biogenesis [BR:
lci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LCK_01438 (groEL)
Chaperones and folding catalysts [BR:
lci03110
]
Heat shock proteins
HSP60 / Chaperonin
LCK_01438 (groEL)
Mitochondrial biogenesis [BR:
lci03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LCK_01438 (groEL)
Exosome [BR:
lci04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LCK_01438 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
LCK_01438 (groEL)
Exosomal proteins of breast cancer cells
LCK_01438 (groEL)
Exosomal proteins of colorectal cancer cells
LCK_01438 (groEL)
Exosomal proteins of bladder cancer cells
LCK_01438 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
DALR_2
EAD9
Motif
Other DBs
NCBI-ProteinID:
ACA83262
UniProt:
B1MVK8
LinkDB
All DBs
Position
complement(1519359..1520978)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKELKFSEDARAKMKAGVDKLADTVKTTIGPKGRNVVLEQSYGAPTITNDGVTIAKAIE
LEDHFENMGAKLVAEVASKTNDIAGDGTTTATVLTQAIVAEGLKNVTAGANPVGIRTGIE
KATAAAVAKLHEMSHTVNTKDEIAQIASISAANEEVGALIAEAMDKVGNDGVITIEESKG
IETTLDVVEGMQFDRGYMSQYMVTDNDKMEANLDNPYILITDKKIGNIQDILPVLQAVVE
QGRAMLIIADDITGEALPTLVLNKMRGTFNVVAVKAPGFGDRRKAQLEDIAILTGGTVIT
EDLGLNLKDVTIDQLGQASKVNVTKDNTTIVEGGGDKAAVATRVETIKQQIAETTSDFDR
EKLQERLAKLAGGVAVINVGAATETELKERKYRIEHALNATRAAVEEGFVAGGGTALVNA
ISAVEALSEAGDVQTGINTVIKALESPVRQIAENAGLEGSVIVNKLKDQDEGFGYNAATD
EWVDMIAAGIVDPTKVTRSALQNAASVSALLLTTEAVVAEEPKDETPMPMPQGGMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaattaaagttttcagaagatgcacgtgctaagatgaaggctggcgttgat
aagcttgctgacacagttaagacaacaattggtcctaagggccgtaatgttgttttggaa
cagtcatacggcgcaccaacgatcacaaatgatggtgtaacaattgctaaagcaattgaa
ttagaagatcattttgagaatatgggcgctaaactagtcgctgaagtcgcctcaaagaca
aatgatattgctggtgatggcacaacaacagcaacggttttgacacaagcaatcgttgca
gaaggcttgaaaaacgtcacagctggggctaacccagttggtatccgtacgggtattgaa
aaggcaactgcggctgctgtcgcaaaattgcatgaaatgtcacatacagttaatacaaaa
gatgaaattgctcagattgcttcaatttcagcggctaatgaagaagtaggtgctttaatt
gccgaggcaatggataaggttggtaatgacggtgtcattaccattgaagaatcaaagggt
attgaaacaacactcgatgttgttgaaggtatgcaattcgatcgaggttacatgtcacag
tacatggtaactgacaatgacaagatggaagcaaacttggataatccatacatcttgatt
acagataagaagattggtaacattcaagatattttgcctgtgttacaagctgttgttgag
caaggtcgtgcgatgctaattattgctgatgatatcaccggtgaagcattaccaacactt
gtactaaacaagatgcgtggtacatttaatgttgttgcggttaaggcaccaggattcggt
gatcgtcgtaaagcacaacttgaagacattgctatcttaactggtggtacggttattacc
gaagatcttggattgaatttgaaagatgttacaattgatcagcttggacaagcaagcaag
gttaatgtgacaaaggacaacacaacgattgtggaaggcggtggtgacaaagcagctgta
gcaacgcgtgtggaaacaattaagcaacaaatcgctgaaacaacttctgactttgatcgc
gaaaagttacaagagcgtttggcaaaattggctggtggtgttgccgtcattaacgttggt
gcagcaaccgaaactgaactcaaggaacgcaagtatcgtatcgaacatgctttgaacgca
acgcgtgcagctgttgaagaaggtttcgttgctggtggtggcacagcgcttgttaatgcc
atttctgctgtagaagctttgtcagaggctggcgatgtacagactggcattaacacagtg
attaaggcgcttgaatcaccagtacgtcagattgctgagaatgctggccttgaaggctca
gtaattgtcaacaagttgaaagatcaagacgaaggatttggttacaatgcggcaactgat
gaatgggttgatatgattgccgctggtatcgtggatccaactaaggtaacacgttctgcc
ttgcaaaatgcagcctctgtctcagctttgttgttgactactgaggcggtagttgctgaa
gaaccaaaagatgaaacacctatgcctatgccacaaggtggtatgccaggcatgatgtaa
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