Leuconostoc citreum: LCK_01571
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Entry
LCK_01571 CDS
T00663
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lci
Leuconostoc citreum
Pathway
lci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCK_01571 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lci03021
]
LCK_01571 (rpoA)
03400 DNA repair and recombination proteins [BR:
lci03400
]
LCK_01571 (rpoA)
Enzymes [BR:
lci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LCK_01571 (rpoA)
Transcription machinery [BR:
lci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCK_01571 (rpoA)
DNA repair and recombination proteins [BR:
lci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCK_01571 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
dATP-dGTP_PPHyd
DUF961
Motif
Other DBs
NCBI-ProteinID:
ACA83394
UniProt:
B1MVZ0
LinkDB
All DBs
Position
complement(1648783..1649727)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPNIHNIEEDAHYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVNTVQIDGVV
HEFSTVDGVVEDVTQIILNLKKVVLAIDSDDERSLEIDVQGPADVTAADLQAGADVEVLN
PDLHIATVAAGKSLHMTVTAVKGRGYSSADENKQLRDEMPIGVLAVDSIYTPIERVNYHV
ENTRVGSRDDYDKLTFDIWTNGSIKPSDALSLGSKILAEHLNLFMDISPVAAEANVMVEA
EPVAASASDSAPIEDLDLSVRSYNCLKRAGINTIVELTDRTEADMMKVRNLGRKSLDEIQ
EKLTEMGLGFRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaagccaaatattcataacatcgaagaggatgcgcactatggcaag
tttgtcgtagaacctcttgagcgtggatacggtacaacgctaggtaactcattgcgtcgt
atcttactttcatcgcttccgggcgcagccgttaatacggttcaaattgacggcgttgtc
cacgaattttcaacagtggatggcgttgttgaagatgtcacacaaattatcttaaacctt
aagaaagttgtgttggcgattgattcagatgatgaacgtagccttgaaattgatgttcaa
ggtcctgcagatgttactgctgctgatttgcaagcaggagctgatgtagaagttttgaat
cctgatttgcatatcgctactgtggcagcaggtaagtcattgcatatgacggtcacggca
gttaaaggtcgtggttattcatcggctgacgagaataagcaattgcgcgacgaaatgcct
atcggcgtgttggcagttgactcaatttatacgcctatcgaacgtgtgaactatcatgtt
gaaaacacacgtgttggatcacgtgatgattatgataagctcacttttgatatttggaca
aatggttcaatcaagccaagtgatgctttgagcctcggttcaaagattttggccgaacat
ttgaacttgttcatggacatatctccagtggcagctgaagccaatgttatggtagaagca
gaacctgttgcagctagtgcgtcagattcagcgccaattgaagatttggacttatcagtt
cgttcttataattgtctcaaacgggccggtatcaacaccattgtggagttgacagatcgc
actgaagccgacatgatgaaggtgcgtaatctcggtcggaaatcacttgacgaaatccaa
gaaaagctaacagaaatgggcttaggattccgcaaggaagattaa
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