Novilysobacter ciconiae: INQ41_00710
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Entry
INQ41_00710 CDS
T08092
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic03420
Nucleotide excision repair
lcic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
INQ41_00710 (uvrD)
03430 Mismatch repair
INQ41_00710 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcic03400
]
INQ41_00710 (uvrD)
Enzymes [BR:
lcic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
INQ41_00710 (uvrD)
DNA repair and recombination proteins [BR:
lcic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
INQ41_00710 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
INQ41_00710 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QOW19649
UniProt:
A0A7S6ZSN6
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All DBs
Position
153116..155320
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AA seq
734 aa
AA seq
DB search
MDVSHLLDALNPAQRDAVSAPPGHYLILAGAGSGKTRVLTHRIAWLNEVFGVPTHGILAV
TFTNKAAAEMRHRVDAQLPSGVRGMWIGTFHGIAHRLLRLHWQEARLPEAFQVIDSDDQL
RLVKRVVQALELDDTRFPPRQIVWWINAQKDEGRRPQHLQPDPGDQWTDVMRRCYEAYQE
RCDRAGLVDFAELLLRAHELLRDNPALLAHYRHRFGEILVDEFQDTNAIQYGFIRLLAGD
TGKVFAVGDDDQSIYGWRGAKVENMQKFLNDFGVDGKAGSAGAQTIRLEQNYRSSANILD
AANAVIAHNPDRLGKKLWTDSGGGDPIDVYQAYNEIDEARFVVERLAQWVRDGGSHGDVA
ILYRSNAQSRAFEEQLLAEKVPYRVYGGQRFFERAEIKDTLAYLRLVANRNDDAAFERAV
NTPTRGIGERTLDEVRRRARDQAIPLWDAARTLTGDTVLAARARNALAGFITLIEATEAD
IAEMPLQEKIDHVLLRSGLREHYARESKGTLDSRTDNLDELVSVASRFVHADEEDAQAMP
ELVAFLAYASLESGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGLEEGLFPNQRSIEEA
GRLEEERRLAYVGITRAREKLVLSHAEARRIHGQEMYGIPSRFLREIPPALLHEVRPKLQ
VSRPMYNSAPRRDLEHAAIEAPPLPLGANVSHPKFGTGVVTDFEGAGAHARVQVNFADVG
SKWLVLSYANLSPA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgcttgacgcgctcaaccccgcccagcgcgacgcggtcagcgcg
ccgcccggccactacctgatcctcgccggcgccggttccggcaaaacccgcgtgttgacc
caccgcattgcctggctcaacgaagtcttcggcgtgccgacccacggcatcctcgccgtc
accttcaccaacaaggccgccgccgagatgcgccaccgcgtcgacgcgcagctgcccagt
ggcgtgcgcggcatgtggatcggcaccttccacggcatcgcccatcgcctgctgcgcctg
cactggcaggaagccaggttgcccgaggccttccaggtcatcgattcggacgaccagctg
cggctggtcaagcgcgtggtgcaggcgctggagctggacgacacccgtttcccgccgcgc
cagatcgtctggtggatcaacgcgcaaaaggacgagggccggcggccacagcatctgcaa
ccagacccgggcgatcagtggaccgacgtgatgcggcgctgctacgaggcctaccaggag
cgctgcgaccgcgccggcctggtggatttcgccgagctgctgctgcgcgcccacgagctg
ctgcgcgacaacccggctttgctcgcgcattaccggcaccgcttcggcgagattctggtc
gacgagttccaggacaccaacgccatccagtacggcttcatccgcctgctggccggtgac
accggaaaggttttcgccgtcggcgacgatgaccagtcgatctacggctggcgcggcgcc
aaggtcgagaacatgcagaagttcctcaacgacttcggcgtcgatggcaaggccgggagc
gcgggcgcgcagaccatccggctggagcagaactaccgctccagcgcgaacatcctggat
gcggcgaacgcggtgatcgcccacaaccccgaccgcctgggcaagaagctgtggaccgac
agcggcggcggcgatccgatcgacgtctaccaggcctacaacgagatcgacgaggcgcgc
ttcgtggtcgagcggctggcgcagtgggtgcgcgacggtggcagccacggcgacgtggcg
atcctgtaccgcagcaacgcccagtcgcgcgcgtttgaagagcagctgctggcggaaaag
gtgccctaccgggtgtacggcggccagcgctttttcgagcgcgccgagatcaaggacacc
ctggcctacctgcgcctggtcgccaaccgcaacgacgatgccgccttcgagcgcgcggtc
aatacgcccacccgcggcatcggcgagcgcaccctggacgaagtccgccggcgcgcacgc
gaccaggcgatcccgctgtgggacgcggcgcgcacactgaccggcgacacggtgctggcc
gcgcgtgcgcgcaatgcgctggccggcttcatcaccctgatcgaggcgaccgaggcagac
atcgcggagatgccgctgcaggagaagatcgaccacgtcctgctgcgctccggtttgcgc
gagcactacgcgcgcgaatccaagggcacgctggactcgcgcaccgacaacctggatgag
ctggtgtcggtcgcctcgcgcttcgtccacgccgacgaggaggacgcgcaggcgatgccc
gagctggtggccttcctcgcgtatgcgtcgctggaatcgggcgagggccaggcccaggcg
ggcgaggacggcgtgcagctgatgaccctgcacagcgccaaggggctggagttcccgctg
gtattcctggccgggctggaggaaggcctgttcccgaaccaacgctccatcgaggaggcc
ggccggctggaggaagagcgccggctggcttacgtcggcatcacccgcgcgcgcgagaag
ctcgtgctcagccacgccgaggcgcggcgcatccacggccaggagatgtacggcatcccg
tcgcgcttcctgcgcgagatcccaccggcgctgctgcatgaggtgcggcccaagctgcag
gtctcgcgcccgatgtacaacagcgccccgcggcgcgacctcgagcacgccgccatcgaa
gctccgccgctgccgctgggcgccaacgtcagccatcccaagttcggcaccggcgtggtg
accgacttcgagggcgccggcgcccacgcgcgggtgcaggtcaatttcgccgacgtgggc
agcaagtggctggttctctcctacgccaatctgagcccggcatga
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