KEGG   Lysobacter ciconiae: INQ41_00725
Entry
INQ41_00725       CDS       T08092                                 
Symbol
alkB
Name
(GenBank) DNA oxidative demethylase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
lcic  Lysobacter ciconiae
Brite
KEGG Orthology (KO) [BR:lcic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcic03400]
    INQ41_00725 (alkB)
Enzymes [BR:lcic01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     INQ41_00725 (alkB)
DNA repair and recombination proteins [BR:lcic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    INQ41_00725 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy_3
Other DBs
NCBI-ProteinID: QOW19652
UniProt: A0A7S6ZSA4
LinkDB
Position
160945..161613
AA seq 222 aa
MSGDLFAGIAAGSRLQLGDQAWLLHGFALAAADALLPALKDVIQAAPFRHMCTPGGRAMS
VATTSCGTLGWVSDRGGYRYARHDPASGRDWPTMPAPMRELATAAAAAAGFPDFRPDACL
INRYRPGTRLSLHQDRDEPDLGQPIVSVSLGLPATFLFGGMARSDRAVRVPLDHGDVVVW
GGVDRLRFHGVLPVAPGVHPQLGAQRINLTFRRAGPAGGTTA
NT seq 669 nt   +upstreamnt  +downstreamnt
gtgagcggcgacctgtttgccggcatcgccgccggcagccgcctgcaactgggggatcag
gcctggctgctgcacggtttcgcactggccgccgcggacgcgctgctgccggccctgaag
gacgtcatccaggccgcgccgtttcgccacatgtgtaccccgggcggccgcgcgatgtcg
gtggcgacgaccagttgcggcacgctgggctgggtcagcgaccgcggcggctaccgctac
gccaggcatgatcctgccagtggccgcgactggccgaccatgccagcgcccatgcgagag
ctggccaccgcagcggccgcggcggccggttttcccgatttccggcccgacgcctgcctg
atcaaccgctaccgtcccggcacccggctcagcctgcaccaggaccgcgacgagcccgac
ctgggccagccgatcgtgtcggtgtcgctcggactgccggcgacgttccttttcggtggt
atggcgcgtagcgatcgcgccgtgcgcgtccccttggatcacggggatgtcgtcgtgtgg
ggcggggtggaccggctgcgcttccacggcgtgctgccggtcgcgccgggcgtgcatccg
caactgggcgcgcagcggatcaatctgacgttccgccgcgccggtcccgccggcggcacg
acggcctaa

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