Novilysobacter ciconiae: INQ41_00940
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Entry
INQ41_00940 CDS
T08092
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INQ41_00940 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcic03021
]
INQ41_00940 (rho)
03019 Messenger RNA biogenesis [BR:
lcic03019
]
INQ41_00940 (rho)
Transcription machinery [BR:
lcic03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
INQ41_00940 (rho)
Messenger RNA biogenesis [BR:
lcic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
INQ41_00940 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
S1CSD-TOTE-2
OB_RNB
AAA
AAA_25
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOW20697
UniProt:
A0A7S6UI39
LinkDB
All DBs
Position
complement(210330..212183)
Genome browser
AA seq
617 aa
AA seq
DB search
MRKTRVSKTTAAKADSPQSELPMTPAAKPEVAKPAPPAPAAPASAPAAPKADAAPAAQAP
KPAPKPAAKPESAAAGGDTAPASKPRDAAPAAAPASGGGDAARQDSGDQHGKGQENGGPG
GDGNPRPPRDRQHRDQDGGRSNNRRERFRSKRERGGGGGGGGGGGGRGGPRDGLPSDDGG
NEPFIPRSNPQVPEGFPTYSLGDLKRMPAHKLLEIAEQLNISEGVARARKQDVIFAVLKV
LTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHLSGRI
RFPKDGERYFALSIVDTINGEPLEASKNKVLFENLTALFPRRKFHLERGDGSTEDITGRI
LDLMAPQGKGQRALIVSPPKAGKTMMMQQIATAISHNHPDVHMIVLLIDERPEEVTEMQR
TVRGEVISSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVLPSS
GKVLSGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNS
EVHLSRRIAEKRVYPAIDINRSGTRREDYLIEPELLQKIWILRKLLHGMDEIGAMEFLLD
KMKSSKSNDEFFSSMKR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaagacgcgcgtgagcaaaaccacggctgccaaggccgattcgccgcagagcgaa
ctgccgatgacgccggccgccaagcccgaggtcgcgaagcccgcacctcccgccccggcc
gctcccgcgtccgcgccggctgcaccgaaggccgacgccgcgcccgccgcgcaggcaccc
aaaccggctcccaagcctgcggcgaagccggaatcggcagcggctggaggcgacaccgcg
ccggcgagcaagcccagggatgcggcccccgctgcggcacccgcgtccggcggcggcgat
gctgcccgccaggacagcggcgaccagcacggcaagggccaggagaacggcggtcccggc
ggcgacggcaacccgcgtccaccccgcgaccgccagcaccgtgaccaggacggcggccgc
agcaacaaccgccgcgaacggttccgcagcaagcgcgagcgtggcggcggcggcggcggt
ggtggcggtggcggtggccggggcggcccgcgcgacggcctgcccagcgacgacggcggc
aacgagccgttcattccgcgttccaacccgcaggtgccagagggcttccccacctattcg
ctgggcgacctcaagcgcatgccggcgcacaagctgctggaaatcgccgagcagctgaac
atctccgaaggtgtcgcccgcgcccgcaagcaggacgtcatcttcgccgtgctcaaggtg
ctcacccgccatggcgagggcgtcgccgccgatggcgtgctggagatcctgcccgacgga
ttcggtttcctgcgcgccgccgaagcctcctacctggccggcccggacgatacctacatc
tcgcccagccagatccgccgcttcaacctgcgcaccggcgaccatctgtcgggccggatc
cggttcccgaaggacggcgagcgctatttcgccctctcgatcgtggatacgatcaacggc
gagccgctggaagcgtccaagaacaaggtcctgttcgagaacctgacagcgctgttcccg
cgccgcaagttccaccttgagcgcggcgacggttccaccgaggacatcaccggccggatc
ctcgacctgatggccccgcagggcaagggccagcgcgccctgattgtcagcccgcccaag
gccggcaagacgatgatgatgcagcagatcgccaccgcgatcagccacaaccatccggac
gtgcacatgatcgtgctgctgatcgacgagcggcccgaggaagtcaccgagatgcagcgc
accgtgcgcggcgaggtgatcagctccacgttcgacgagccggccgcgcgccatgtgcag
gtcgccgagatggtgatcgagcgggccaagcgcctggtcgagcacaagaaggacgtggtg
atcctgctcgactccatcacccgtctggcccgcgcctacaacaacgtcctgcccagctcg
ggcaaggtgctgtccggcggcgtcgacgccaacgcgctgcaccgccccaagcggttcttc
ggcgcggcccgcaacgtcgaggaaggcggcagcctgaccatcatcgccaccgcgctggtc
gataccggcagcaagatggacgaggtgatctacgaggaattcaagggcaccggcaactcc
gaggtgcacctgagccgccgcatcgccgagaagcgcgtgtacccggcgatcgacatcaac
cgctccggcacccgccgcgaggattacctgatcgagcccgagctgctgcagaagatctgg
atcctgcgcaagctgctgcacggcatggacgagatcggcgcgatggagttcctgctcgac
aagatgaagagctccaagtccaacgacgagttcttctcctcgatgaagcgctga
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