Novilysobacter ciconiae: INQ41_00995
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Entry
INQ41_00995 CDS
T08092
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
INQ41_00995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcic03400
]
INQ41_00995
Enzymes [BR:
lcic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
INQ41_00995
DNA repair and recombination proteins [BR:
lcic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
INQ41_00995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOW19694
UniProt:
A0A7S6ZSQ1
LinkDB
All DBs
Position
complement(222619..224862)
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AA seq
747 aa
AA seq
DB search
MPDRRPENRLLRVAVPVPLPRLFDYLPADDGGHVQVGSRVRVPFGSRELVGVVVELPAIA
DVDTASLKPALEILDDQPLFAGELFDSLQWLGRYTHAPIGEIFATALPGPLRRGEPLPDT
HDWAWRMTAAGHAGLADMRPGRPRLLAERLQGGAVNEAYLGPDEADQDDATGAGAWRAAA
RTLAQRGLAERIAVPPSQAAPAPRQGPQLHAEQQLAVDAVLAARHHFAPFLLNGVTGSGK
TEVYLHAIGDCLARGKQALVLVPEIGLTPQLLGRFRARLGVPVHALHSGLSDGERTRTWA
ACLRGEARVVVGTRSAVFLPLPDAGLIVIDEEHDGSFKQLDGIRYHARDFALVRARALDV
PILLGSATPSLESLQNAVGGRYAHLRLTRRAGNARPPAVRVLDVRKRPLQAGLSPELLDA
VAAALDADGQVLVFKNRRGYAPVLLCHDCGWSAQCRQCDAAMTVHAGGRRLQCHHCGARR
PTPNACPDCGGLALQSQGAGTERIEEFLRERFPDVPVLRIDRGTTSRRDALETHLARFGD
TRGILVGTQMLAKGHDLPNLTLVAVVGIDEGLFSADFRAPEKLAQLLIQVAGRAGRADRA
GQVVLQTHHPEHPLLDSLLNGGYGAFASIELEQREAAVFPPFAHLAMFRAEAKQVELADA
FLLLVRRALEDADRTLRAAAAPALELSGPLPAPMPRRAGYQRSQLLLSATARARLHRVLQ
QALPVIRASAEARRVRWSLDVDPVDLY
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcgccgtcctgaaaaccgcctgttgcgcgttgccgttcccgtgccgctgccg
cgtctgttcgactatctgccggccgacgacggtggccacgtccaggtgggaagccgggtc
agggtgccgttcggctcacgcgagctggtcggcgtggtggtcgaacttccggcgatcgcc
gacgtggataccgccagcctgaagcccgcgctggagatcctcgacgatcagccgctgttt
gcaggcgagctgttcgactcgctgcaatggctgggccgctacacccacgccccgatcggc
gagatcttcgccaccgcactgccgggaccgctgcgccgcggcgagcccctgcccgatacc
cacgactgggcgtggcggatgactgctgccgggcacgccggccttgccgacatgcgccct
ggccggccgcgcctgctggccgaacgcctgcagggcggcgcggtcaacgaagcgtacctg
ggtccggacgaggcagaccaggacgacgccacgggcgccggcgcctggcgcgcggcggcg
cgaaccctcgcccagcggggtctggcggagcggatcgcggtgccgccatcgcaagccgcc
cccgcgccccgccagggaccccagcttcacgcagagcagcagctcgccgtcgacgcggtc
ctcgccgcgcggcaccatttcgcgcccttcctgctcaatggcgtgaccggcagcggcaag
accgaggtctacctgcacgcgatcggggactgcctggcccgtggcaagcaggcgctcgtg
ctggtgccggagatcggcctgacgccgcagctgctcgggcgtttccgcgcccgcttgggc
gtgcccgtgcacgcgctgcattccggcctgtcggacggcgaacgcacccggacctgggcg
gcgtgcctgcgcggcgaggcgcgcgtcgtggtcgggacgcgctcggcggtgttcctgccg
ttgcccgacgccggcctgatcgtgatcgacgaggaacacgacggcagcttcaagcagctg
gacggcatccgctaccacgcccgcgatttcgccctggtgcgcgcccgggcgctggacgtg
ccgatcctgctgggcagcgccacgccgtcactggagtcactgcagaacgcggtgggcggc
cgctacgcgcacctgcgtttgacgcgccgtgccggcaacgcgcgaccgccggcggtgcgc
gtgctcgacgtgcgcaagcgaccgctgcaggccggcctgtcgccggaactgctggacgcc
gtggccgcggcgctggatgccgacggtcaggtgctggtgttcaagaaccgtcgcgggtac
gcgccggtgctgctgtgccacgactgcggctggagcgcgcaatgccgccagtgcgacgcg
gcgatgaccgtgcacgccggcggtcggcgcctgcaatgccaccactgcggcgcgcgccgg
cccacgcccaacgcctgcccggactgcggcgggctggccctgcagtctcagggcgcgggc
accgaacgcatcgaggagttcctgcgcgagcgcttccccgacgtcccggtgctgcgcatc
gaccgcggcacgacgagccggcgcgacgcactggagacgcacctggcccgtttcggtgac
acccgcggcatcctggtcggcacccagatgctggccaagggccacgacctgcccaacctg
accctggtcgcggtcgtggggatcgacgagggcctgttcagtgccgacttccgcgcgccg
gagaagctcgcccagctgttgatccaggtcgccggccgggccggccgcgccgaccgcgcc
ggccaggtcgtgctgcagacccaccacccggagcacccgctgctggacagcctgttgaac
ggcggctacggcgcgttcgcgtcaatcgaactggagcagcgcgaggcggcggtgtttccg
ccgttcgcgcacctggcgatgttccgcgccgaagccaaacaggtcgaactcgccgatgcc
tttctgttgctggtgcgccgcgcgctggaggatgccgaccgcaccctgcgcgcggcggcg
gcaccggcactggagctcagtggccccttgcccgcgccgatgccgcggcgtgcgggctac
cagcgcagccagctgctgctgtcggccaccgcccgcgctcgcctgcaccgggtcctgcag
caggcgttgccggtgatccgtgccagcgcggaggcgcgcagggtgcgctggtcattggat
gtggacccggtggatctgtactga
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